| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_7027 |
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| Symbol | |
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| ID | 6125936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 1146600 |
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| End bp | 1148036 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641648031 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001774623 |
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| Protein GI | 170735509 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.532033 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.585091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGCG TCTTCGCCCT GCTCGCCGCG AGCCTGCTGG CCGCGTGCTC GATCGCGCCG
CAGCCGCTCA CGCCCGTCCC GGTCGGACGC GACGGGTTCC GCCATGCCGA TCCGGCGACC
GATACGCGCG CGCCGTCGCT CGCCGCGTGG CCCGCGTGGT TCGGCGACCC GCAGCTCGGC
CGCCTCGTCG ACGCCGCGCT CGCGCACAAC CTCGACATCC GCGCGGCGGC CGCGCGCGTC
GACCAGGCGC AGGCGCTGCT CGGCGTGCGC GAAGCCGCGC TGGCGCCGAC CGTGCGCGTC
GACCCGTCGT TCAGCCGCAC GCGGGTGTCC GGCACGGTCG ACAACGCGCT GCCGAAGCGC
ACGATGCACA ACTGGTCGGT GCCCGTCGCC GCGAGCTACG AAGTCGATCT CTGGGGCCGC
TTGCGCGGCG ATGCCGACGT CGGCGAACAG AATGTGCTGC AGGCGGCGGC CGATCGCGAT
GCGGTGCGTC TGCGGGTGGC GACCGAAGTG GCCGTCGACT ACCTGACGCT GCGCTACGTC
GACGACGATC TCGTGACGCT CGTGCGCGCG ATCGGGCTGC GGCGCACCGC GCTCGAAGTG
ATCGCCGCCC GCGTGCGGGC CGGCGCGGCG AGCGATCTCG ACGGGCTGCG CGCGTCGGCC
GATCTCGATA CCGCGCATGC CGATCTCGCG GAGAGCCGCC GGCTGCGCGA GAACCTCGTC
GACGCCCTCG CGGTGCTGAC CGGCGTGTCG CCGACCGCGT TCGACGTCGA CACGGGCGCC
GTGCCCGTGC AGGTGCCGGA GGTGCCGGCC GGGCTGCCGT CCGCGCTGCT CGCCCAACGC
CCGGATGTAT TCGCGGCGGC ACGGCGCGCC GATGCGGCGT CGCTCGAGCT GGGCATCGCG
CGCACCGCGT GGCTGCCGAC GCTGACGCTG ACCGCCGACG GCGGTTTCGC CACCCGCGAC
CTGCGCTCGT TTCTCGACCG CAACAGCTCG CTGTGGAGTC TCGGCGCGAA CGTCGCGCTG
ACGCTGTTCG ACGGCGGCAA GCGCGATGCA GCGGTGGCCG CCGCGCGGGC CGGCACGGAC
GTCGCCGACG CCGACTATCG TGCGACCGCG ATCGGCGCGT TGCGCGACGT GCAGGATGCG
CTCAACGACA TCGCCGCGCA AAAGGAGCGG ATCGTGCGCT ACGACAGCGC GGCGCGCGCG
ACGGACGCGG CGGCGCGGCT ATCGCTGAGC CGCTACGCGC ACGGTTACGT CAGCTATCTG
GAAGTCATCG ACGCCGATCG CGACGCACTG AATGCGCGGC GCCAGCTGAT TCACAGCCGG
CAGGCGCTGG CCATCGCGAC GGTGAGCCTC GTGCGTGCGT TGGGCGGCGG GTGGACGCCG
CCGGCGCATG CCGGCCGGGG CGAGTTGCGC GACGCGACGC AAGCCGACGC GCGATGA
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| Protein sequence | MTRVFALLAA SLLAACSIAP QPLTPVPVGR DGFRHADPAT DTRAPSLAAW PAWFGDPQLG
RLVDAALAHN LDIRAAAARV DQAQALLGVR EAALAPTVRV DPSFSRTRVS GTVDNALPKR
TMHNWSVPVA ASYEVDLWGR LRGDADVGEQ NVLQAAADRD AVRLRVATEV AVDYLTLRYV
DDDLVTLVRA IGLRRTALEV IAARVRAGAA SDLDGLRASA DLDTAHADLA ESRRLRENLV
DALAVLTGVS PTAFDVDTGA VPVQVPEVPA GLPSALLAQR PDVFAAARRA DAASLELGIA
RTAWLPTLTL TADGGFATRD LRSFLDRNSS LWSLGANVAL TLFDGGKRDA AVAAARAGTD
VADADYRATA IGALRDVQDA LNDIAAQKER IVRYDSAARA TDAAARLSLS RYAHGYVSYL
EVIDADRDAL NARRQLIHSR QALAIATVSL VRALGGGWTP PAHAGRGELR DATQADAR
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