Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_7017 |
Symbol | |
ID | 6125926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 1134077 |
End bp | 1135966 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641648021 |
Product | amidohydrolase 3 |
Protein accession | YP_001774613 |
Protein GI | 170735499 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0592148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTTAGAG CGACGGAACC CGCGCGTTCG GCGGACCTCG TCGTGTTCAA CGGCAAGATC GCGACCCAGG ACGAACAACG CTCGTTCGTC CGTGCGCTCG CCGTGAAGGA CGGGACCATC GTCGCGACCG GCGACGATCG CGACATGCTG CGCCATGCGC ACGACGACAC CGCCTGTATC GACCTGAACG GTCGCACCGT GATTCCGGGC TTGATCGACG CGCACCTGCA GGCGATCCGC GGCGGCATGA ACTTCAACCT CGAGGTGCGC TGGGACGGCG TGCCGTCGCT CGCCGACGCG CTCGAGCTGC TGGGCCGGCA GGTGCGACGC ACGCCCGCGC CGCACTGGGC GCGCGTGGCG GGCGGCTGGA CCGCGCTGCA GTTCGCGGAA AAGCGCGGGC CGACGACGGC CGAGCTCAAC GCGATCGCGC CCGACACGCC GGTATTCGTC CAGCATCTGG CCGACAGTGC GTGGCTGAAT GCGGCCGCGC TGCGCGCGCT CGGCTACGGG CGCGACACGC CCGATCCGCC CGGCGGCGAA CTGCGGCGCG ACCGCCATGG GCGGCCGACC GGGCTGCTGC TCGCGCGTCC GGACCCGGCG GTGCTGGGCG CGGTGCTCGC CCGCGCGCCG AGGCTCGATG CGGCCGACCG GGTCGACTCG ACGCGGCAGT TCATGCACGC GCTGAACCGC GTCGGCGTGA CGAGCGCGAT CGACGCCGGC GGCGACGGCC TCGCGTATCC GGACGACTAT GCGGCGGTCG CGACGCTCGC GCGGCGCGGC GAATTGACGA CGCGCATCGC CTATGCGCTG GGCGCACGGC ACGCGGGCCG GGAGCTCGAC GATTTCGCGA AATGGATCGC GCTGACCGCG CCCGGCGACG GCGACGCGTT CCTGCGCGCG AGCGGCGCGG GCGAGCGATT GCTGTTCTCG GCGGTCGATC TCGGGAATTT CCTCGAACCG CGCGTCGAGT TGCCCGCGTC CATCGAGGTC GAACTGGCGG CCATTGTCCG GCTGCTCGTG CATCATCGCT GGCCGTTCCG GCTACAGGCG ACCTACGACG AATCGATCGG CCGCTTCCTC GACGTGTTCG AAGCGGTGGA TCGCGACACG CCGTTCGACG GGCTGCGCTG GTGCTTCGAC CGCTGCGAGA CGATTTCGGA CGCCAATATC GCGCGGGTCG CGGCGCTGGG CGGCGGCATC ACCGTGCAGC CGCGCATGGC GTTCCAGGGC GAAGCCTTCA TCGCGCGCCA TGGTGCGGCG GCGGCCACGC GCGCGCCGCC GCTCCGCGCG ATGCTCGCGG CCGGGCTGCC GGTCGGCGCG GGGTCCGGCG CGATGGGCGC GGCGAGCTAC AACCCGTTCG TCGCGCTGTA CTGGATGGTG TCGGGCCGCA GCGTGGGCGG CACCGCGCTG TATCCGGCGC GCAACCGGCT CGGCCGGATG GAGGCGCTGC GCCGCTACAC GGTCGGCAGC GCGTGGTTCT CCGCGGACGA GCATCGCAAG GGCGCGCTGG TGCCCGGCCG GTACGCCGAT TTCGCGGTGC TGAGCGACGA TTACTTCACG ATCGATGTGC GACGCATCCC GACGCTGTCG TCGGTGCTGA CGGTCGTCGA CGGCAGGGTC GTGCACGCGG AACAGGAATT CTCGCCGCTT GCGCCGCCGC CGCCGCCCGT CAGCCCCGCA TGGTCGCCGG TCGCCGCAGG CGGTGCGGCA GACGCCGACG TGCGCGACCG TTCGCATGCG TCGGCGGCGG GCGACGCGTG CGTGGTGCCC GGCGTCGATG CGTGCCGTGC GCGCGGTGAT GGGCGCCGCT TCGCGCGACC GCGCTATCCG ACGGCAAGTG CGGCCGCCGA GCGCTGCGAA GCCTTCGGCC GCTGCTGCGT CGCGTTTTGA
|
Protein sequence | MLRATEPARS ADLVVFNGKI ATQDEQRSFV RALAVKDGTI VATGDDRDML RHAHDDTACI DLNGRTVIPG LIDAHLQAIR GGMNFNLEVR WDGVPSLADA LELLGRQVRR TPAPHWARVA GGWTALQFAE KRGPTTAELN AIAPDTPVFV QHLADSAWLN AAALRALGYG RDTPDPPGGE LRRDRHGRPT GLLLARPDPA VLGAVLARAP RLDAADRVDS TRQFMHALNR VGVTSAIDAG GDGLAYPDDY AAVATLARRG ELTTRIAYAL GARHAGRELD DFAKWIALTA PGDGDAFLRA SGAGERLLFS AVDLGNFLEP RVELPASIEV ELAAIVRLLV HHRWPFRLQA TYDESIGRFL DVFEAVDRDT PFDGLRWCFD RCETISDANI ARVAALGGGI TVQPRMAFQG EAFIARHGAA AATRAPPLRA MLAAGLPVGA GSGAMGAASY NPFVALYWMV SGRSVGGTAL YPARNRLGRM EALRRYTVGS AWFSADEHRK GALVPGRYAD FAVLSDDYFT IDVRRIPTLS SVLTVVDGRV VHAEQEFSPL APPPPPVSPA WSPVAAGGAA DADVRDRSHA SAAGDACVVP GVDACRARGD GRRFARPRYP TASAAAERCE AFGRCCVAF
|
| |