| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_7016 |
|---|
| Symbol | |
|---|
| ID | 6125925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 1131011 |
|---|
| End bp | 1133932 |
|---|
| Gene Length | 2922 bp |
|---|
| Protein Length | 973 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641648020 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001774612 |
|---|
| Protein GI | 170735498 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3903] Predicted ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.252317 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0265916 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGA TCGGAACTTT GTCGGTGGAC TTCGAGCAAC GCGACATTCG CCGCCACGGC
GCGTCGCTGC GCATCGGCGC GCGCGCGCTC GACATTCTCG AAGTCCTGCA CCGCGCGAGC
GGTTCGGTCG TGTCGAAAGA CGACATCATG GATGCGGTCT GGCCGGGCCT GATCGTCGAG
GAAAACCGGC TTCAGGTGCA TGTGGCCACG CTGCGCAAGG CGCTCGGCGC GAGCCGCGAC
CTGATCAAGA CGGTGCCCGG GCGCGGCTAC CTGCTGGTCG CGAGCGCGTC GCCCGGACCG
GATCTCGTGC CCGCGGGCGA AGCGCCGGCC GTCGCCGTAC CGCCGGCGGT CGCGGCGCTG
CCGGATGCCT GCGCGTTGTC GCTGCTCCCG CCGCTGGTCG GGCGCGACGC CGAAATCGCG
CAGATCGTCG ACATGCTCGA ACGCACGCCG GTCATCACGC TCGTCGGCGC GGGCGGCATC
GGCAAGACGA GTCTTGCGAT GCGCGTCGCG CACGGCGTGC GCAGCCGCGC GCAAGAGCGC
GTGCTGTTCG TGGAACTGGC GCGCGCGTCG ACGCGCGACG ACATGCTGAT CGCGCTCGCC
GCCGAGCTCG GCCTCGATAC GCCCGGCGTG CCCGCCATCG ACCGCATCGG CGACGCGTTC
GCGACGTCGC GCTGCCTGCT GGTACTCGAC AACGCGGAGC ACATCGTCGA TCTGGTGGCG
AGCCTTGTCG AAACGCTGAC GTCGAGCGCC GGCTCGCTGC GCGTGCTCGT GACGAGCCGC
GAGCCGCTGC ACATCTCGGC CGAAGCGGTG CTGCGCATGA GCCCGCTCGC GGTGCCGGAC
GGTAACGCGT CCGCCGCGGA AATCGTCCGT TGTTCAGCCG TCGAGCTGTT TCTGGAACGC
GTGCGTGCGG CCGCGCCGGA TTGCACGGTC GACGAAGCCG GCGTGCGGCT GATCGGCGAC
ATCTGCCGGC GCCTCGACGG GCTGCCGCTC GCGATCGAAC TGGCCGCGGC GCGCGTGGCG
ACGCTCGGGC TCGCGGTCGT CGCGTCGCGC CTCGACGACC GGCTGAACCT GCTGACCGGC
GGGCTGCGCT CGGCGCTGCC GCGTCATCAG ACGCTGCGCG CGACGTTCGA CTGGAGCTAC
GTGCTGCTCG ACCGGGCCGC GCGCGCGCTG TTTCGCCGGA TGGGGTGCTT CATCGGGCCG
TTTTCGTTCG ATGCCGCGCG CGCGGTCGCG ACCGAGCCTG GCACCTCGGC CGCGGACATG
ATCGCGGTGC TCGGCGAGCT GGTGGCGAAA TCGCTGGTGA CCGTCGAATT CGATGGCGCG
TATGCGCGCT ACCGGCTGAC CGAATCGACG CGCGCGTACG CGCTGGAAAA ACTGCACAAC
GAGGGCGAGT TCGAGCGCAT CGTCGCGCGC CATGCGGCGT ACGAGCGCGA GCGGGCGGGC
GCACCTCCCG CGGCGCCCGT GCTGCTCGCC GACGTGCCGC CTGCGGACGC GCCCGCGCCG
GCCGTGGACG AACCGGTGGA CGCCGCCGAA GCCGCGGGCG TGCCCGAGCC CGACCGGCTG
GCGCGCGCGC TGCTGGAGCC GTCGCGGATG CGCGCGTGCA CGGCGCGTGC GCGCCAGGTA
CTCGACGGGC TGGACACGGA CGCCACGGGC CCGGTCGACG TCGCGCGCGA GATGCGGCTG
CGGGCGGCCT GCGCGTCGGC GCTGCTGCAT ACCGACGGCG ACGCGCTGGC CGCCGCCGCG
ATGTGGGACC GCACGCTCGG TCTCGCCGCG CACATCGGCG ACGACGCGTT CGACGCGCGC
GCGCTGGTCG GGCTGTGGAA CACGATGCTG ACGCTGTCGG ACATTCACGA ATCGCTGCGC
TACGCGATGC GCTTCGAGCG GGCGGCCGAG CGGCGCGGCG ACCGGTCGCA GCGGTTGCTG
GCCAACACGA TGGTCGCGAC GTCGCTGCAT TACTTCGGCG AGCATGCGCA GGCGCGCGAG
CGGCTGGAAG CGGCGACGGC CGAGCTGGCC GACGCGGGCG AACCGCCGTG CGCGCAGGCC
GCGCTGGGCG TCGACATGGC GACGCTGGGG CGCACGATGC TGATCCGTCT GCTCTGGATG
CAGGGCGAGC CCGAGCACGC GATGCGGGTC GCCGCGCAAG CGGTCGAGCA TGCACGCCGC
GGCCCGTCGC CCCTCCCGCT GTGCATCGTG CTCGGCGCGG CTGCCGTGCC GATCGCGCTG
CGCTACGGCG ATCACGACAT CACCTCCGAC TATCTCGCGA CGCTGCGCGC GACCGCCGAC
ACACACGGTT TCGACATCTG GCGCAGTCAC GCGGAATGCC TGACCGGCCA GTTCGACATC
CAGGCCGGTC ATCCCGGCGC GGGCCTCGCC CGACTCGAAC CCGCGCTGCG GCGCGTCGAG
GCGAGCGGTT TCCGGCGCGT GCTCGCGCCG TTGACCGTCG CATACGCGGA GGGCCTCGTG
CGGACCGGCC GCGCCGATGA AGCGTGCACC CGGCTCGATG CGACGCTCGC ACGCTGCCGC
GCGCACGGCG AGCACCTGTT CGTCCCCGAA CTGCTGCGCG TGAGAGGCGT CGCGATGCTC
GAACAGGCGC GCATCGTCGG CGCGGATCTC GCCGCGGCGT ACGAGGCCGA CGGGCATCGC
CATCTGCAGA TGGCGATCCA GACCGCGAAC GCGCAGGGCG CCGCGATGTG GGCGCTGCGC
AGCTCGCTCG ATCTCGCCGA TCACCTGATC GAGCGCGGGC ACACCGCGCA GGCGTCCGCG
CTGGTCGCCG GCGTCGCGCG GCACTTCGAT CCGCATTCGC GTGCCCACGA CGTGCGCCGT
TTGCTGCGCG TGCAGAGCTT CGTGCGTCAG GGTGCGCCGC TCGCGCCATG CCTGACGCGC
GCACGACGCG ATACCGCCGA CGCGGCGCAG CAGGCGGCAT GA
|
|---|
| Protein sequence | MIQIGTLSVD FEQRDIRRHG ASLRIGARAL DILEVLHRAS GSVVSKDDIM DAVWPGLIVE
ENRLQVHVAT LRKALGASRD LIKTVPGRGY LLVASASPGP DLVPAGEAPA VAVPPAVAAL
PDACALSLLP PLVGRDAEIA QIVDMLERTP VITLVGAGGI GKTSLAMRVA HGVRSRAQER
VLFVELARAS TRDDMLIALA AELGLDTPGV PAIDRIGDAF ATSRCLLVLD NAEHIVDLVA
SLVETLTSSA GSLRVLVTSR EPLHISAEAV LRMSPLAVPD GNASAAEIVR CSAVELFLER
VRAAAPDCTV DEAGVRLIGD ICRRLDGLPL AIELAAARVA TLGLAVVASR LDDRLNLLTG
GLRSALPRHQ TLRATFDWSY VLLDRAARAL FRRMGCFIGP FSFDAARAVA TEPGTSAADM
IAVLGELVAK SLVTVEFDGA YARYRLTEST RAYALEKLHN EGEFERIVAR HAAYERERAG
APPAAPVLLA DVPPADAPAP AVDEPVDAAE AAGVPEPDRL ARALLEPSRM RACTARARQV
LDGLDTDATG PVDVAREMRL RAACASALLH TDGDALAAAA MWDRTLGLAA HIGDDAFDAR
ALVGLWNTML TLSDIHESLR YAMRFERAAE RRGDRSQRLL ANTMVATSLH YFGEHAQARE
RLEAATAELA DAGEPPCAQA ALGVDMATLG RTMLIRLLWM QGEPEHAMRV AAQAVEHARR
GPSPLPLCIV LGAAAVPIAL RYGDHDITSD YLATLRATAD THGFDIWRSH AECLTGQFDI
QAGHPGAGLA RLEPALRRVE ASGFRRVLAP LTVAYAEGLV RTGRADEACT RLDATLARCR
AHGEHLFVPE LLRVRGVAML EQARIVGADL AAAYEADGHR HLQMAIQTAN AQGAAMWALR
SSLDLADHLI ERGHTAQASA LVAGVARHFD PHSRAHDVRR LLRVQSFVRQ GAPLAPCLTR
ARRDTADAAQ QAA
|
|---|
| |