Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_7010 |
Symbol | |
ID | 6125919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 1122985 |
End bp | 1124874 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641648014 |
Product | amidohydrolase 3 |
Protein accession | YP_001774606 |
Protein GI | 170735492 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0816572 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCAA CCGTGACCCA ACCGGATCTG ATCCTGCATA ACGGACGATT CACGACGCTC GATCGCGCGA ACCCTGTCGC GACGGCGGTC GCGATTGCCG CCGGCCGCTT CGTCGCCGTC GGCAGCGAAG CGGACGTGAT GCCGCTCGCG GGCCGCGCGA CGAAGGTGGT CGATCTCGGC GGCCGCGGCG TGCTGCCGGG CCTGATCGAC AACCACTGCC ACGTGATTCG TGGCGGACTG AACTACAACA TGGAACTGCG CTGGGACGGC GTGCCGTCGC TTGCGCTCGC GATGGAGATG CTCAAGCAGC AGGTCGCGAT CACGCCGGCG CCGCAGTGGG TGCGCGTGGT CGGCGGCTTC ACCGAACATC AGTTCGTGGA GAAACGGCTG CCGACGATCG AAGAACTGAA CGCAGTCGCG CCCGATACGC CGGTGTTCAT CCTGCACCTG TACGATCGCG CGCTGCTGAA CGCGGCGGCG CTGCGGGTGG TCGGCTACAC GAAGGACACG CCGGAGCCGC CGGGCGGCAC GATCCTGCGC GATGCCGCAG GCAACCCGAC CGGCCTGCTG CTCGCGAACC CGAATGCGAC GATCCTCTAT GCGACGCTCG CGAAAGGCCC GAAGCTGCCG TTCGAGTATC AGTACAACTC GACGCGCCAT TTCATGCGTG AGCTGAACCG GCTCGGCGTG ACGGGCGTGA TCGACGCGGG CGGCGGCTCG CAGAATTATC CCGACGATTA CGAAGTGATC CGCAAGCTGC ACGACGCGGG CGAGATGACG ATCCGGATCG CGTACAACCT GTTCACGCAG AAGCCGAACG CGGAGAAGGA AGACTTCGTG AACTGGACGA AGAGCGTCAA GTACCACGAC GGCACTGACT ACTTCCGCAA CAACGGCGCG GGCGAGATGC TGGCGTTTTC CGCGGCCGAT TTCGAAGACT TCCGCGTGGC GCGGCCGGAC CTGCCCGCGC AGATGGAAGA CGACCTCGAA GGCGTCGTGC GCGTGCTCGC GGAAAACCGT TGGCCGTGGC GCATGCACGC GACCTATGAC GAAACGATCA GCCGCGCGCT CGACGTGTTC GAGAAGGTCA ACGAGGACAT CCCGCTCGAC GGGCTGAACT GGTTCTTCGA TCACGCGGAA ACGATCACCG AGCAATCGAT GGACCGGATC GCCGCGCTCG GCGGCGGCAT CGCGGTGCAG CACCGGATGG CGTACCAGGG CGAATACTTC GTCGAGCGCT ACGGCGCGCA AGCCGCGGAG GCGACGCCGC CGGTCGCGAA GATGCTCGGC AAGGGGCTCA AGGTGTCGGC CGGCACGGAC GCGACGCGCG TCGCGTCGTA CAACCCGTGG GTGTCGCTTT CATGGCTCGT GACGGGCAAG ACGGTCGGCG GCCTGAGGAT GTATCCGCAG CGCAACCTGC TCGATCGCGA AACCGCGCTG CGGATGTGGA CCGAGTACGT GACGTGGTTC TCGAACGAAG AGGGCAAGAA AGGACGCATC GCGGTCGGGC AGCTTGCCGA CCTGGTGGTC CCGGATCGCG ATTTCTTCGC GTGCGCGGAG GACGATATCG CCGGCACGAC CGCGTTGCTG ACGGTGGTCG ACGGGAAGAT CGTATGGGGC GCGGGGCCGT TCGCGTCGCA CGACGCGCCG ATCCCGCCGG CGATGCCGGA CTGGTCGCCG GTGCGCGAGT TCGGGGGCTA TGGCGGCTGG GGCGCGACGC AGCGCAACGG CGCGCCGCTG CAACGCGCGG CGGCCGCCGC GATGTGCGCC TGCGCGAACG AATGCAACGT TCACCAGCAT GCGCACGCGG GCGCATGGGG CCGCACGTTG CCGACGTCCG ACGCGAAGGG CTTCTGGGGC GCGTTCGGGT GCTCGTGCTG GGCGATCTGA
|
Protein sequence | MTATVTQPDL ILHNGRFTTL DRANPVATAV AIAAGRFVAV GSEADVMPLA GRATKVVDLG GRGVLPGLID NHCHVIRGGL NYNMELRWDG VPSLALAMEM LKQQVAITPA PQWVRVVGGF TEHQFVEKRL PTIEELNAVA PDTPVFILHL YDRALLNAAA LRVVGYTKDT PEPPGGTILR DAAGNPTGLL LANPNATILY ATLAKGPKLP FEYQYNSTRH FMRELNRLGV TGVIDAGGGS QNYPDDYEVI RKLHDAGEMT IRIAYNLFTQ KPNAEKEDFV NWTKSVKYHD GTDYFRNNGA GEMLAFSAAD FEDFRVARPD LPAQMEDDLE GVVRVLAENR WPWRMHATYD ETISRALDVF EKVNEDIPLD GLNWFFDHAE TITEQSMDRI AALGGGIAVQ HRMAYQGEYF VERYGAQAAE ATPPVAKMLG KGLKVSAGTD ATRVASYNPW VSLSWLVTGK TVGGLRMYPQ RNLLDRETAL RMWTEYVTWF SNEEGKKGRI AVGQLADLVV PDRDFFACAE DDIAGTTALL TVVDGKIVWG AGPFASHDAP IPPAMPDWSP VREFGGYGGW GATQRNGAPL QRAAAAAMCA CANECNVHQH AHAGAWGRTL PTSDAKGFWG AFGCSCWAI
|
| |