| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6996 |
|---|
| Symbol | |
|---|
| ID | 6125905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 1113205 |
|---|
| End bp | 1114011 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641648000 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001774592 |
|---|
| Protein GI | 170735478 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0898754 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCCGA CGACCCGACC GTTCCCCCGA CGCACCTGGC TGGCTGCGCT GCTCGCCGCC
CCCGTGATCG CGCTGTTCGC CGCCGCCCCG GCCCATGCCG ATGCGCTCGA CACCATCGCG
AAAAACGGCA CGCTGCGCGT CGCGGTGCCC GAGGACTATC CGCCGTTCGG ATCGGTCGGC
ACGGACATGC AGCCGCAGGG CTACGACATC GACATGGCAG GACTCCTAGC CAAGTCGCTC
GGCGTCAAGC TGAAGCTGGT GCCCGTGAAC AGCGCGAACC GGATTCCGTA CCTGACGACC
AACAAGGTCG ACATGGTGAT CTCGTCGCTC GGCAAGACCC CGGAGCGCGA GAAGGTCATC
GATTTCTCGA GCGCGTACGC ACCGTATTTC CAGGGCGTGT TCGGGCCGTC CGACGTGAAG
GTGAGCACGC CGGCCGACCT CACCGGCAAG ACGGTCGGCG CCACGCGCGG CGCGCTCGAG
GAGATCGCGC TGTCGCAGCT CGCGCCGAAC GCGACGATCA AGCGCTTCGA GGACAACAAC
GCGACGATCC AGGCGTTCCT GTCGGGGCAG GTCCAGTTGA TCGCGGCCGG CAACATCGTC
GCGGCGGCGA TTCTCGCGAA GAATCCGCCG CGCCGCCCCG AGGTGAAGTT CGTGATCAAG
AATTCGCCGT GCTTCGTCGG CGTCAACAAG AACGAACCGC GCCTGCTCGC GAAGATCGAC
GATGCGATCG CGCATGCGAA GCAGGACGGC TCGCTGGGCG AGATGTCGCG CAAGTGGCTC
GGCCAGCCGT TGCCGGCCGG ACTGTGA
|
|---|
| Protein sequence | MSPTTRPFPR RTWLAALLAA PVIALFAAAP AHADALDTIA KNGTLRVAVP EDYPPFGSVG
TDMQPQGYDI DMAGLLAKSL GVKLKLVPVN SANRIPYLTT NKVDMVISSL GKTPEREKVI
DFSSAYAPYF QGVFGPSDVK VSTPADLTGK TVGATRGALE EIALSQLAPN ATIKRFEDNN
ATIQAFLSGQ VQLIAAGNIV AAAILAKNPP RRPEVKFVIK NSPCFVGVNK NEPRLLAKID
DAIAHAKQDG SLGEMSRKWL GQPLPAGL
|
|---|
| |