| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6980 |
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| Symbol | |
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| ID | 6125889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 1090864 |
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| End bp | 1092534 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641647984 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001774576 |
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| Protein GI | 170735462 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0315325 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCATC GAGACACCAA GTCGGTGGAC TACATCGTTG TCGGCGGCGG ATCGACCGGT
TGCGTCATCG CCGGACGCCT CAGCGAAGAC GAACGCTCGA GCGTCGCCCT TCTCGAGGAA
GGGCCGCGAG ACCGCAGCCC CTATATTCAT ATTCCCGGCG CCTACTACAA GACTGCGCAA
GGCCCGCTCC TCAAGCGCAT CCCGTGGCAT CCGGCCCAGG GCCACGCCCG CCCCGCAATG
CCGACGATGG TCCAGGCCAG CGTGCTCGGC GGCGGAAGTT CCGTGAACGC GATGATCTAC
ATCCGTGGCG TCCCGTCGGA CTACGACCAG TGGCGAGATT CCGGCGCGAC CGGCTGGGGC
TTCGATGACG TCCTGCCCTA CTTCAAGCGC TCGGAAGACA ACGAGCGCTT CTGCAACGAC
GTCCACGGCA CCGGCGGCCC GCTGCGCGTG TCCGACATCC CGCATATTCA TCCGTTGACC
AAGGCATGGC TCAAGGCCTG CCAGCAATCC GGGCTGCCGT ACAACGAGGA TTTCAATAGC
GGGCATCCGG CCGGCTGCGG CCTTTATCAG ATCACCGCAC GCAATGGCCG TCGCAGCAGC
GCTGCCGTCG CCTATATTCA TCCGGCGCTG AATCGCCCCA ACCTGACGGT CCGTACCGGC
GTGCGGGTCA CACGAATTCT GATCGAAAAA GGCCGTGCAG TCGGTGTCGA ATTCCGGCGA
AACGGGCGCA TCGAGCAGAT GCGGGCGAAT CGCGAAGTCA TCGTTTCGGC CGGTGCGCTC
AGTACCCCGA CGCTGCTGAT GCTGTCCGGG ATCGGACCGT CCTCGGCATT GCAAAGGCAT
GGAATCGCCG TCGAGCAGGA CCTCCCCGGC GTGGGCCGGA ATCTTCAGGA CCACATCGAA
ATTTCGCTCG TCTACCAGTT GAGCGGACCG TATAGCTACG ACAAATACAA GAAGCCGCAC
TGGAAGGCGC TGGCCGGCCT GAACTATCTG TTGTTCAGGA ACGGGCCGGC CGCGTCCAAC
CTGATCGAGG GCGGCGCGTT CTGGTGGGGC GACAAGGAAG CCTTGACGCC CGACATTCAA
TATTTCCTCG TGGTCGGCGC CGGAATCGAA GAAGGCGTCG ACAGCGTGCC GGGAGGCAAC
GGCTGCACCA TCAATCTCGG ACAGATCCGC CCTCGCTCGC GCGGCTTCGT CGAGCTGTCG
AGCCCCGATC CGATGGACGC CCCGCGAGTG TTCCCCGAGT ACTTCAGCGA TCCGTACGAC
CTCGAAGCGG TGGTCGACGG TTGCGAAAAG GCGATCGACA TCATGGGACA GCCCGCGATC
GGCAAGTACA TCGCGCAACG GATCGTACCG GGCAAACAGG CAGCCAGTCG CGACGAATTG
AGGAAATTTG TCCGGCAGGA GGCGCACGCC GCGCTTCACC CTTGCGGAAC TTGCCGCATG
GGCACCGATA GCGACTCCGT GGTGGACCCT TCGCTACGCG TACACGGTAT CGACGGACTG
AGAGTGGCGG ATGCGTCGAT CATGCCGAAC ATCATTTCGG GCAATCTCAA CGCCGTCTGC
ATCATGATCG GCGAAAAGGC AGCGGACCTC ATCCTGGGCA AGGCGCCGCT GACGCGCATC
GGGCACGCAT CCGTTCCGAT CGATTCCGAA GCGTCTCGAG TCACTTCGTG A
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| Protein sequence | MTHRDTKSVD YIVVGGGSTG CVIAGRLSED ERSSVALLEE GPRDRSPYIH IPGAYYKTAQ
GPLLKRIPWH PAQGHARPAM PTMVQASVLG GGSSVNAMIY IRGVPSDYDQ WRDSGATGWG
FDDVLPYFKR SEDNERFCND VHGTGGPLRV SDIPHIHPLT KAWLKACQQS GLPYNEDFNS
GHPAGCGLYQ ITARNGRRSS AAVAYIHPAL NRPNLTVRTG VRVTRILIEK GRAVGVEFRR
NGRIEQMRAN REVIVSAGAL STPTLLMLSG IGPSSALQRH GIAVEQDLPG VGRNLQDHIE
ISLVYQLSGP YSYDKYKKPH WKALAGLNYL LFRNGPAASN LIEGGAFWWG DKEALTPDIQ
YFLVVGAGIE EGVDSVPGGN GCTINLGQIR PRSRGFVELS SPDPMDAPRV FPEYFSDPYD
LEAVVDGCEK AIDIMGQPAI GKYIAQRIVP GKQAASRDEL RKFVRQEAHA ALHPCGTCRM
GTDSDSVVDP SLRVHGIDGL RVADASIMPN IISGNLNAVC IMIGEKAADL ILGKAPLTRI
GHASVPIDSE ASRVTS
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