Gene Bcenmc03_6967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6967 
Symbol 
ID6125876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp1075301 
End bp1076905 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content65% 
IMG OID641647971 
Productglucose-methanol-choline oxidoreductase 
Protein accessionYP_001774563 
Protein GI170735449 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG CAACGCTTGT TCATCGTCCG GCGTCCGGTC TGTCCAGTTT CGCGCCGGTG 
CTCCGGCGCG AACTCCCGAC GGTCGTGCCC GGCAGCGATG GAATCATTAC CTGCGACGTG
GTCATCGTGG GGTCCGGCAT GGGCGGCTCG AGTTTCGCGC AAGGCATCGC AGGTCACGGC
CTCGACGTGC TCATCGTCGA GCGCGGCGAT TTCCTGCCTC GTGAAATCCA GAACTGGCAG
GCCGAAGCCG TATTTCGCGA CGGACGCTAC CGCAACGCGG AGTCGTGGGA CGACGACGCC
GGCAAACCGT TTTCACCCGG CGTGTTCTAC TACGTCGGCG GCAACACGAA GGTCTTCGGC
GCGATGCTTC CACGGTTCAG GGAAGCCGAT TTCGGCACGA TTCAACACGC CGAGGGAATT
TCGCCCGCGT GGCCGATCGC TTATGCCGAC ATGGAGCCGT ACTACGCGGC CGCGGAGCGG
CTTTACAACG TCCATGGCGC GGGCGGCCAG GACCCGACCG ATCCGTGGCG CTCCGGCGAC
TATCCGTTTC CCGCGCTGGA ACACGACCCT GCATTGCGGC CGCTCGCCGC GGCGATGCGT
GCGCAAGGCC TTCGTCCGTT CGTGATGCCG GCGGCCGTCA ACTACGGACG CGAACGGCCG
TGCGTGCTCT GCTCGACCTG CGACGGTTAT CCCTGCCTCG TCGATGCGAA GGGCGATGCG
GAAGTGTCCG TGCTGAGGCC GCTCGTCGGC AGCGGCGGCG CACGACTGAT GGTACGCACC
CGAATCGATC GTCTCGTCAT GTCGGCCGAC GGCACGCGCA TCGAGGAAGC GCTCGGCGTT
CGCGACGGGC AACCCGTTCG CATCCGCGCC AAGCGGTTCG TCCTCGCGTG CGGCGCGGTG
AACTCGGCGG CCCTTCTGCT GCGATCGGCC GATCACGCGC ATCCGGAAGG TATCGGCAAC
CGCTCGGGGA TGCTCGGCCG GAACTATATG GTTCACAACA GCACGTTCAT GCTCGCCGTC
GATCCGCGTC GGGCCAACGA CGTGCTGTTC CAGAAAACGC TCGCGGTCAA CGACTGGTAT
TTGCGCTCCC AGCAGAACGC GTTTCCGCTC GGTAACGTGC AGATGCTCGG CAAGATCCGC
GAGCCGATGG TGACGGGCAT GTATCCGTGG CTGCCGAAGG CCGTTTCGCG CTACATGACC
GACCACAGCG TCGATCTGTA CCTGACCAGC GAGGATCTTC CCGATCCGGA GAATCGCGTC
ACGGTCGATC CGCAGTCGGG CCGCATCCGC ATCAGGTGGC GTGCCAACAA CCTGCGTGCA
CACCGGGCGC TCGTGAAGAA GACGGTCGCG ATGATGCGGC GGGCCGGGTA TCCGCTCGTG
TTGACCAAGC GCATGGGCAT TGCAACCAAC TCGCATCAAT GCGGCACGGC CGTGATGGGC
AACGACCCGG GCACGAGTGT GCTCGACACG AACTGCAGGC TTCACGACGT GGAAAACGCG
TGGATCGTCG ACAGTTCGTG GTTCCCGTCC TCCGCGGCGG TGAATCCGGC GCTCACGATC
GCCGCGAATG CGCTTCGTGT GGCCAGGCAG TTCGTCGGTC ACTGA
 
Protein sequence
MSDATLVHRP ASGLSSFAPV LRRELPTVVP GSDGIITCDV VIVGSGMGGS SFAQGIAGHG 
LDVLIVERGD FLPREIQNWQ AEAVFRDGRY RNAESWDDDA GKPFSPGVFY YVGGNTKVFG
AMLPRFREAD FGTIQHAEGI SPAWPIAYAD MEPYYAAAER LYNVHGAGGQ DPTDPWRSGD
YPFPALEHDP ALRPLAAAMR AQGLRPFVMP AAVNYGRERP CVLCSTCDGY PCLVDAKGDA
EVSVLRPLVG SGGARLMVRT RIDRLVMSAD GTRIEEALGV RDGQPVRIRA KRFVLACGAV
NSAALLLRSA DHAHPEGIGN RSGMLGRNYM VHNSTFMLAV DPRRANDVLF QKTLAVNDWY
LRSQQNAFPL GNVQMLGKIR EPMVTGMYPW LPKAVSRYMT DHSVDLYLTS EDLPDPENRV
TVDPQSGRIR IRWRANNLRA HRALVKKTVA MMRRAGYPLV LTKRMGIATN SHQCGTAVMG
NDPGTSVLDT NCRLHDVENA WIVDSSWFPS SAAVNPALTI AANALRVARQ FVGH