Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6967 |
Symbol | |
ID | 6125876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 1075301 |
End bp | 1076905 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641647971 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_001774563 |
Protein GI | 170735449 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATG CAACGCTTGT TCATCGTCCG GCGTCCGGTC TGTCCAGTTT CGCGCCGGTG CTCCGGCGCG AACTCCCGAC GGTCGTGCCC GGCAGCGATG GAATCATTAC CTGCGACGTG GTCATCGTGG GGTCCGGCAT GGGCGGCTCG AGTTTCGCGC AAGGCATCGC AGGTCACGGC CTCGACGTGC TCATCGTCGA GCGCGGCGAT TTCCTGCCTC GTGAAATCCA GAACTGGCAG GCCGAAGCCG TATTTCGCGA CGGACGCTAC CGCAACGCGG AGTCGTGGGA CGACGACGCC GGCAAACCGT TTTCACCCGG CGTGTTCTAC TACGTCGGCG GCAACACGAA GGTCTTCGGC GCGATGCTTC CACGGTTCAG GGAAGCCGAT TTCGGCACGA TTCAACACGC CGAGGGAATT TCGCCCGCGT GGCCGATCGC TTATGCCGAC ATGGAGCCGT ACTACGCGGC CGCGGAGCGG CTTTACAACG TCCATGGCGC GGGCGGCCAG GACCCGACCG ATCCGTGGCG CTCCGGCGAC TATCCGTTTC CCGCGCTGGA ACACGACCCT GCATTGCGGC CGCTCGCCGC GGCGATGCGT GCGCAAGGCC TTCGTCCGTT CGTGATGCCG GCGGCCGTCA ACTACGGACG CGAACGGCCG TGCGTGCTCT GCTCGACCTG CGACGGTTAT CCCTGCCTCG TCGATGCGAA GGGCGATGCG GAAGTGTCCG TGCTGAGGCC GCTCGTCGGC AGCGGCGGCG CACGACTGAT GGTACGCACC CGAATCGATC GTCTCGTCAT GTCGGCCGAC GGCACGCGCA TCGAGGAAGC GCTCGGCGTT CGCGACGGGC AACCCGTTCG CATCCGCGCC AAGCGGTTCG TCCTCGCGTG CGGCGCGGTG AACTCGGCGG CCCTTCTGCT GCGATCGGCC GATCACGCGC ATCCGGAAGG TATCGGCAAC CGCTCGGGGA TGCTCGGCCG GAACTATATG GTTCACAACA GCACGTTCAT GCTCGCCGTC GATCCGCGTC GGGCCAACGA CGTGCTGTTC CAGAAAACGC TCGCGGTCAA CGACTGGTAT TTGCGCTCCC AGCAGAACGC GTTTCCGCTC GGTAACGTGC AGATGCTCGG CAAGATCCGC GAGCCGATGG TGACGGGCAT GTATCCGTGG CTGCCGAAGG CCGTTTCGCG CTACATGACC GACCACAGCG TCGATCTGTA CCTGACCAGC GAGGATCTTC CCGATCCGGA GAATCGCGTC ACGGTCGATC CGCAGTCGGG CCGCATCCGC ATCAGGTGGC GTGCCAACAA CCTGCGTGCA CACCGGGCGC TCGTGAAGAA GACGGTCGCG ATGATGCGGC GGGCCGGGTA TCCGCTCGTG TTGACCAAGC GCATGGGCAT TGCAACCAAC TCGCATCAAT GCGGCACGGC CGTGATGGGC AACGACCCGG GCACGAGTGT GCTCGACACG AACTGCAGGC TTCACGACGT GGAAAACGCG TGGATCGTCG ACAGTTCGTG GTTCCCGTCC TCCGCGGCGG TGAATCCGGC GCTCACGATC GCCGCGAATG CGCTTCGTGT GGCCAGGCAG TTCGTCGGTC ACTGA
|
Protein sequence | MSDATLVHRP ASGLSSFAPV LRRELPTVVP GSDGIITCDV VIVGSGMGGS SFAQGIAGHG LDVLIVERGD FLPREIQNWQ AEAVFRDGRY RNAESWDDDA GKPFSPGVFY YVGGNTKVFG AMLPRFREAD FGTIQHAEGI SPAWPIAYAD MEPYYAAAER LYNVHGAGGQ DPTDPWRSGD YPFPALEHDP ALRPLAAAMR AQGLRPFVMP AAVNYGRERP CVLCSTCDGY PCLVDAKGDA EVSVLRPLVG SGGARLMVRT RIDRLVMSAD GTRIEEALGV RDGQPVRIRA KRFVLACGAV NSAALLLRSA DHAHPEGIGN RSGMLGRNYM VHNSTFMLAV DPRRANDVLF QKTLAVNDWY LRSQQNAFPL GNVQMLGKIR EPMVTGMYPW LPKAVSRYMT DHSVDLYLTS EDLPDPENRV TVDPQSGRIR IRWRANNLRA HRALVKKTVA MMRRAGYPLV LTKRMGIATN SHQCGTAVMG NDPGTSVLDT NCRLHDVENA WIVDSSWFPS SAAVNPALTI AANALRVARQ FVGH
|
| |