Gene Bcenmc03_6964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6964 
Symbol 
ID6125873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp1072118 
End bp1073209 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content65% 
IMG OID641647968 
ProductABC transporter related 
Protein accessionYP_001774560 
Protein GI170735446 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCTC TGCATATTCG CGACGTCCGC AAGAACTACG GCAGCGTTGC GTGCCTCAAG 
GCAATCAACA TCGATGCCGA CGACGGTGAA TTCCTCGTGC TGCTCGGCCC GTCCGGCTGC
GGGAAGTCGA CCCTGCTGAA CGCGATCGCG GGGCTCGAAC CGGTCAACGA CGGCGAGATC
GTCATCGACG GTTCGGTCGT CAACGACGTC GAATCCGCGA AGCGCGATAT CGCGATGGTG
TTCCAGTCGT ATGCGCTTTA CCCGACGATG ACGGTGCGCA ACAACCTGAC ATTCGGAATG
CGCGTGCGGG GGGCATCGCG ATCCGAGCAG GAGGAGGCGG TGAAGCGGGT CGCGGCGATC
CTGCAGCTCG ATCAGTTGCT CGATCGCAAG CCTAGCCAGC TGTCGGGCGG GCAGCGCCAG
CGCGTGGCCA TGGGGCGCGC GATGGTGCGG GAACCGAAGA TCTTCCTGTT CGACGAGCCG
TTGTCGAATC TCGACGCGAA ACTGCGCACG GAAATGCGCG CGGAAATCAA GAAGCTGCAC
CAGCGTGTCG GCACGACCAC GGTCTACGTG ACGCATGACC AGATCGAAGC GATGACGCTG
GCGACGAAGA TCGTCGTCAT GCGGGGCGGC GAGGTACAGC AGATCGGCAC GCCGGAGGAT
GTTTACGATC GTCCGGCGAA CCTGTTCGTC GCGCGTTTCA TCGGGTCGCC CGCGATGAAC
TGCCTGACGG GCGTGCTGCG TGGCCGTGAC ACCCACGCGG TTTTCATCGG CGGCGACGGC
AGCGGGCACA CCGTCGAGAT CGCGCTGGGT GCGCCGAGCG ACGCGCAACG CGGCTACCTC
GACCGGGACG TCGTACTGGG CGTTCGCCCG GAATGGCTCG CGCCGGGCGT CGGGGCAACG
AGCTTCCAGG CGACGGTCGA CGTCGTGGAG CCGACCGGCG CCGACAACTT CGTGCTGCTG
TCGGTCGCGG GCGAATCGAT CATGGCCCGG TTCGCGCCCG GTGTCGGGCG AGTCGGGGAC
GTGATGCAGC TCGTCGTCAA TGCGGACAAG GCACTGATCT TCGACCCGGC GACCGAACAG
CGCGTCGTCT GA
 
Protein sequence
MASLHIRDVR KNYGSVACLK AINIDADDGE FLVLLGPSGC GKSTLLNAIA GLEPVNDGEI 
VIDGSVVNDV ESAKRDIAMV FQSYALYPTM TVRNNLTFGM RVRGASRSEQ EEAVKRVAAI
LQLDQLLDRK PSQLSGGQRQ RVAMGRAMVR EPKIFLFDEP LSNLDAKLRT EMRAEIKKLH
QRVGTTTVYV THDQIEAMTL ATKIVVMRGG EVQQIGTPED VYDRPANLFV ARFIGSPAMN
CLTGVLRGRD THAVFIGGDG SGHTVEIALG APSDAQRGYL DRDVVLGVRP EWLAPGVGAT
SFQATVDVVE PTGADNFVLL SVAGESIMAR FAPGVGRVGD VMQLVVNADK ALIFDPATEQ
RVV