Gene Bcenmc03_6955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6955 
Symbol 
ID6125864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp1061591 
End bp1063009 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content64% 
IMG OID641647959 
ProductNa+/solute symporter 
Protein accessionYP_001774551 
Protein GI170735437 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.269545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCT TCAGTTATTG GGATACCGCC ACCATCATCG GGATGGTGGT TGCCTACATC 
GTGGTGACGA GCGTGGTCAG CATCCGGCTG CGCAGCCGCA ATTCCGAACA GTTCATGGTG
GCCGGGCGTT CGATGCCGGC GCTGGTGGTC GCGATCCTGC TGATGTCGGA ATTCATCGGC
GCGAAATCGA CCGTCGGCAC GTCGCAGGAG GCGTTCTCGG CCGGCATCGC CGCGTCGTGG
TCGGTGCTCG CGGCCGCCAT CGGTTTCCTG CTCTTCGGCC TGTTCATGGC CAGGCGCCTG
TACGCATCCG GTGAATTCAC GATCTCCGGA TTCATCGCGC AGCGATACGG GCACGGTGCG
AAGCTCGCCG TTTCCGCGAT CATGATCTAT GCGCTGTTCG TCGTGAACGT CGGCAACTAC
GTGAGCGGCG CGGCAGCGAT CTCGACGGTC ATGCGCATCA ACCTGCCGAC GGCCGCCGTC
ATCACCGCGA TCGTCAGCAC GATCTATTTC GTGTGGGGCG GCCTCAAGAG CGTCGCATAC
CTGACGGTCG TGCACAGCGC CGTGAAGCTG CTCGGCATCG CCATTCTGGT CGGCGTCGCG
TGGAAGCTGT CGGGCGGTAT CGCGCCGGTG GCACGGAGCC TGCCCGCGCA CTACTTCACG
TGGTCCGGTG CGCTGTCGGG CGGCACGATC GGCGCATGGA TCATCGGCAC GGCCGGCGCG
ATCTTCTCGA CGCAGTTCAT CATCCAGGCG ATCTCGGCCA CCCGCAGCCC CGAGGGGGCG
CGTGCATCGT CGCTGATCGC CGCGTTCCTG TGCGTGCCGA TCGCGCTCGC GCTCGGTTTC
ATCGGCGTGG CGGCCAAGTA CCTGTATCCC GGCGTCAAGA GCCTGTACGC GCTGCCGGTG
TTCCTGCAGC ACATGAATCC GATCCTGGCC GGCATCGTCA CGACGTCGCT CGTGGCATCG
ATCTTCGTCA GCGTATGCAC CGTCGCACTG GCGATCGCGT CGCTGATCGT GAAGGACTTC
TATGTGCCGC GTTTCAATCC GACGCCCGAC GTCGAACTGA GAATGACGCG CTGGATCTCG
CTGATCGTCG GCTTCCTGCC GCTGATCTTC GTGCTGTTCG TCCCGCAGAT CCTCGCGCTG
TCGTTCTTCA GCCGCGCGCT GCGGCTGTCC GTGTCGGTCG TCGCGCTGAT CGGCATCTAT
CTGCCGTTCT TCAGCGGCAA GCGCGGTGCC GTGTCGGCCC TCGTCGTCGC GACGCTCGCC
ACGACGTTCT GGTACCTGCT CGGCAACCCG TTCGGCATCG ACAACATGTA CGTCGCACTC
GTGACGCCGG CCATCGTGCT GGTGATCGGC AAGCTGCTGT TTCATGGCGA TGGCGCGAAC
CTTCGCGACA AGCCGCTCAC GCATCGCGAA TCGCACTGA
 
Protein sequence
MATFSYWDTA TIIGMVVAYI VVTSVVSIRL RSRNSEQFMV AGRSMPALVV AILLMSEFIG 
AKSTVGTSQE AFSAGIAASW SVLAAAIGFL LFGLFMARRL YASGEFTISG FIAQRYGHGA
KLAVSAIMIY ALFVVNVGNY VSGAAAISTV MRINLPTAAV ITAIVSTIYF VWGGLKSVAY
LTVVHSAVKL LGIAILVGVA WKLSGGIAPV ARSLPAHYFT WSGALSGGTI GAWIIGTAGA
IFSTQFIIQA ISATRSPEGA RASSLIAAFL CVPIALALGF IGVAAKYLYP GVKSLYALPV
FLQHMNPILA GIVTTSLVAS IFVSVCTVAL AIASLIVKDF YVPRFNPTPD VELRMTRWIS
LIVGFLPLIF VLFVPQILAL SFFSRALRLS VSVVALIGIY LPFFSGKRGA VSALVVATLA
TTFWYLLGNP FGIDNMYVAL VTPAIVLVIG KLLFHGDGAN LRDKPLTHRE SH