Gene Bcenmc03_6949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6949 
Symbol 
ID6125858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp1054149 
End bp1055522 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content65% 
IMG OID641647953 
ProductL-fucose transporter 
Protein accessionYP_001774545 
Protein GI170735431 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID[TIGR00885] L-fucose:H+ symporter permease 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGAA CCCGGATCGA ACACGCCCCC GACGGCTATT ACCTGAATCG CACGCCCCTC 
TTCGCGTTCA CGCTGCTGTG CTGCCTGTTC GCGCTGTGGG GCACCGCCGC GAACCTGAAC
GACGTGCTGA TCGCGCAGTT CAAGAAATCG TTCTTCCTGT CCGATTTCGA ATCGGCATTC
GTGCAGTCCG CGTTCTATCT CGGCTACTTC TTCCTCGCGA TTCCGGCCGC GACCGTCGTG
AAGAAGTTCA GCTACAAGTC GACGATCCTC GTCGGCCTGC TGCTCTACAC GACCGGCTGC
CTGCTGTTCT TCCCGGCCGC GTCGATGGCG AAGTACGGGA TGTTCCTCGT CGCGCTGTTC
GTGATCGCCG CGGGCCTGTC GTTCCTCGAA ACGGCGTCGA ACTCGTATTC GACGCTGATG
GGCCCGCGCG ACACCAGCAC GCGGCGCCTG AATATCTCGC AGACGTTCTA TCCGTTCGGC
GCGATGGCCG GCGTCTACAT GGGCAGCTTC CTGATCTTCA AGGAAGGCGA CGCGTCGCAT
GCACAGCTCG CGGCGATGTC GGCCGCCGAC GCGCACACGC ACCAGCTCGC GATGATCCAG
GCCACGCTCG AGCCGTACAA GTGGCTGATC GTCGTGCTCG TCGCCGTGTT CATCGTGTTC
GCGCTTACGC CCTATCCGGC GTGCAAGGGC AATGCGGCGA GTACCGTTAC GCACCGGATC
GACGCGCGCG GCACGGTCGC GCGCCTGTTC GGCAACCGGC GCTTCGTCGC GGGCGTCGTC
GCGCAATTCC TGTATGTCGG CGCGCAGGTC GGCGTGTGGA GCTTCACGAT CCGGCTCGCG
ATGCAGATCG GCGGCCTCAC CGAACGCGGC GCGTCGCGCT ACCTGCTCGC GACCTTCTTC
GCGTTCTTCG TCGGCAAGCT GATCGCGACG CTCGTGATGA AGCGCGTCGG CCCGGCCAAG
GTGCTGATCG TCTACGGCAT CCTGTGCATC GCGCTGCTCG CGTACACGAT CAGCGTGCAC
AACATCACGG CCGTGTATGC GGCCGTGTGC GTGAGCATCT TCCTCGGCCC GTGCTGGCCG
ACGATCTACG GGCTGACGAT CGACGGCCTC GGCAAGGACA CCGAATACGG CGGCTCGATC
CTCGTGATGA GCATCGTCGG CGGCGCGGTC GTGCCGCTGA TCCAGGGGCT GATCTCCGAT
CACACCGGCG GCAACATGCA GCTCGCGTTC GTCGTGCCGC TGCTGTGCTT CGTCGTGATC
GTGTACTACG GCTTCCACTG CCTGCGTCAC CTGCCGGCGG CGACGCCCGA CGCGGCGGGC
GACGGCCATG CATCCACGCG CTACGCCGCG ACGCGCAACA CGTCGGGAGC CTGA
 
Protein sequence
MSRTRIEHAP DGYYLNRTPL FAFTLLCCLF ALWGTAANLN DVLIAQFKKS FFLSDFESAF 
VQSAFYLGYF FLAIPAATVV KKFSYKSTIL VGLLLYTTGC LLFFPAASMA KYGMFLVALF
VIAAGLSFLE TASNSYSTLM GPRDTSTRRL NISQTFYPFG AMAGVYMGSF LIFKEGDASH
AQLAAMSAAD AHTHQLAMIQ ATLEPYKWLI VVLVAVFIVF ALTPYPACKG NAASTVTHRI
DARGTVARLF GNRRFVAGVV AQFLYVGAQV GVWSFTIRLA MQIGGLTERG ASRYLLATFF
AFFVGKLIAT LVMKRVGPAK VLIVYGILCI ALLAYTISVH NITAVYAAVC VSIFLGPCWP
TIYGLTIDGL GKDTEYGGSI LVMSIVGGAV VPLIQGLISD HTGGNMQLAF VVPLLCFVVI
VYYGFHCLRH LPAATPDAAG DGHASTRYAA TRNTSGA