| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6918 |
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| Symbol | |
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| ID | 6125829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 1021668 |
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| End bp | 1022486 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641647924 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001774516 |
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| Protein GI | 170735402 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0867808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCTC CGAAAGTTTT CTATCAGCGT TTGCGCGGCA AGATCGCGAT CGTCACCGGC
GCCGGTTCGC TCGGCCAGGG CTACGGCACG GGCAAAGCCA TTGCGTGCCT GTTTGCGGCG
GAGGGTGCTT CGGTTTGCCT CGTCGATCAG CAGCACCAAA GGGCGGTCGA AACGCTCGAA
TTGATCGCTG AATCCGGCGG GCAGGGTTTC GTCTGTACAG GCGACATCAC GGATGTGGAC
GTGTGCGCGC GTATCGTCGA CGAGACGGTC GACCGATATG GCGGGCTGGA CATACTCGTG
AACAACGTAG GAATTTCGGG CGCGCCGGGG CGGTTGCAGG ATCTCGACGA GGCGTCCTGG
GACCGCGTGA TGGACGTGAA CCTGAAGAGC GCGTTTCTGA TGAGCCGGGG CGCTGTGCCG
CACATCGTGG CGCGCGGTGG CGGGGCGATC GTCAATATCA GTTCGGTAGC CGGGATACGC
AGTCACGGGT CAGCCGCGTA CGGCTCGTCG AAGGCGGGTA TGGTTGCGTT TACGCGAGAG
TTGGCGGTGA TGTATGGTCG CGATCGTGTG CGCGCTAACG CCATCGCGCC GGGGCATATC
TTTACACCGA TGGTGCACAG CATGCTCGAC GAAGCGGCGC GCGAGCGCCG CCGCAAAATT
GCACCGCTTC CACTGGAAGG GGATGCGTGG GATGTTGCGT CTGCCGCGCT CTTTCTCGCG
AGCGATGAAT CGCGGTTCAT CACCGGCACA TGCTTGCCGG TGGACGGTGG CGTAACGGAG
GTGGCGGCCC TCGCCGCATA CGACCTCGTT GGACAATAG
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| Protein sequence | MPSPKVFYQR LRGKIAIVTG AGSLGQGYGT GKAIACLFAA EGASVCLVDQ QHQRAVETLE
LIAESGGQGF VCTGDITDVD VCARIVDETV DRYGGLDILV NNVGISGAPG RLQDLDEASW
DRVMDVNLKS AFLMSRGAVP HIVARGGGAI VNISSVAGIR SHGSAAYGSS KAGMVAFTRE
LAVMYGRDRV RANAIAPGHI FTPMVHSMLD EAARERRRKI APLPLEGDAW DVASAALFLA
SDESRFITGT CLPVDGGVTE VAALAAYDLV GQ
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