| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6868 |
|---|
| Symbol | |
|---|
| ID | 6125779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 969471 |
|---|
| End bp | 970253 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641647874 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001774466 |
|---|
| Protein GI | 170735352 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0593655 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.256231 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGT TTTCACTGGA AGGACAAATC GCACTCGTCA CGGGCGCGTC GCGCGGTCTT
GGCTTCGCCA TGGCAGGCGC GCTGGCGTCG GCGGGTGCAA CCGTCATTCT GTGTGCGCGA
TCCCGCGCAA GCCTCGAAAC CGCCGCCGAA TCCATTCGTG GAAGCGGAGG AAGCGTCGAT
ATCGAACCGT TCGATCTCAC CGATCAGGAC GCGATCAGAA ACGGCGTGCG TAACGTTCTC
GCGCGTCACG GACGCATCGA CATCCTGCTC AACAATGCCG GCATGTGCGA GTGGAGCGAT
TTTCTGCAGT CGAGCGTCGA GATGTGGCAA AGGACCATGG ATACGAACGT CACGGCAGCG
TACCTTCTCG CGCAGGAAGT CGCACGCCCC ATGATCGAGC ATGGGCACGG ACGCATCATC
AACGTGGGCT CTTATGTTTC GGTGCTCGGC CGCGAGAAAC TTCAAGCGTA CGTGGCCAGC
AAGCACGCGG TCGCCGGGCT CACGAAATCG CTCGGCGCGG AACTCGGCCG GCACGGCATT
CGCTGCAATG GCATTTGCCC CGGCTATTTC CTCACCGATA TGGCCGAGCC CGTCGCGTCG
AATCCGCAGA TGAAGGAGAT CGTGCGCTCG CATATTTCGG TCGGACGCTG GGGAAACCCC
GAGGAACTGG GAGGTGTAGC CGTGTTTCTC GCCTCCGAGG CGAGCTCCTA CATGAACGGC
CAGATGCTGA TGGTCGACGG CGGCGTCTCC GAGATCTTGA GTTTTTCCAT GTCCGTCGTG
TAG
|
|---|
| Protein sequence | MKLFSLEGQI ALVTGASRGL GFAMAGALAS AGATVILCAR SRASLETAAE SIRGSGGSVD
IEPFDLTDQD AIRNGVRNVL ARHGRIDILL NNAGMCEWSD FLQSSVEMWQ RTMDTNVTAA
YLLAQEVARP MIEHGHGRII NVGSYVSVLG REKLQAYVAS KHAVAGLTKS LGAELGRHGI
RCNGICPGYF LTDMAEPVAS NPQMKEIVRS HISVGRWGNP EELGGVAVFL ASEASSYMNG
QMLMVDGGVS EILSFSMSVV
|
|---|
| |