Gene Bcenmc03_6850 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6850 
Symbol 
ID6125762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp947922 
End bp949064 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content65% 
IMG OID641647857 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001774449 
Protein GI170735335 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.441483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTCCTC TACACGGAAT TCGAATTGTC GAGCTGGCCG GCATCGGGCC GGGCCCCATG 
GCGGCGATGC TGCTCGCCGA TCTGGGCGCG ACCGTGTTGC GCATCGAGCG TCGCCAACCG
GTCAAGCTCG GCATCGAGCG CCCGTTGCGC TTCAACCTGC TGCTGCGTAA CCGCAAGACG
ATCGCGCTCG ACCTGAAGGA CCCGGAGGCC GTGGAACTCG TGCTCTCCCT CGTGGAGCGG
GCGGATGCCT TGATCGAAGG CTTCCGCCCG GGCGTGACGG AACGCTTGGG GCTCGGTCCG
CAGATTTGCC TCGAACGCAA TCCGAAGCTG GCCTATGGGC GTATCACGGG ATGGGGTCAG
GACGGCCCGC TTGCGCAGTA CGCGGGGCAT GACCTGAACT ACATCGCGAT TACCGGCGTG
CTCAACGCCA TCGGTCGCCG CGATCAGCCG CCGTCGATTC CGCTTAACCT GATCGGCGAC
TATGCGGGCG GTTCGCTGTA TCTCGCGATG GGGCTCCTCT CGGCGATTAT TCACGCGCGT
AACGGCGGCA CGGGTCAGGT CGTGGATGCC GCGATCGTCG ATGGCACGGC CAATCTCGCC
ACCACTTTCT TCGGCATGCA GGCCGCCGGA ATCTGGCGCG ACGGGCGAGG GACCAACATC
ACGGACTCCG GATCCCACTT CTACGATGCA TACGAATGCG CGGACGGCAA GTGGATCACG
GTCGGCCCCA TCGAGGACAA GTTCTATCTC GAACTGTTGC GCCTGCTCGA TATCGACCCG
CGAACACTAG GTGTGCAACT CGATGAAAAA AATTGGGCAG CCGCGCGTGC GTTGTTTGCG
CTGAAGTTCA AGAGCCGCAC GCGCGACCAA TGGACGACGC TGCTGGAGCA TTCGGACGCG
TGCTTTGCGC CCGTGCTGTC GTGGACGGAG GCGCCCGAGC ACGCGCATCT GAAGGCGCGC
GGCACGTTCA TCGAAGTCGA CGGCATCGTG CAGCCGGCTC CGGCGCCGCG CTTTTCCGCC
ACCGTGCCGG CGAAGCCGAC GGCGCCCGAA GCGCCCGGCG CCGCAACGGT CGACGCCGCG
CTCGCCGCGT GGCTCGAACC GGATCTGATT GGCAAGCTGA AGGAAGCGGG AACGCTGGCC
TGA
 
Protein sequence
MGPLHGIRIV ELAGIGPGPM AAMLLADLGA TVLRIERRQP VKLGIERPLR FNLLLRNRKT 
IALDLKDPEA VELVLSLVER ADALIEGFRP GVTERLGLGP QICLERNPKL AYGRITGWGQ
DGPLAQYAGH DLNYIAITGV LNAIGRRDQP PSIPLNLIGD YAGGSLYLAM GLLSAIIHAR
NGGTGQVVDA AIVDGTANLA TTFFGMQAAG IWRDGRGTNI TDSGSHFYDA YECADGKWIT
VGPIEDKFYL ELLRLLDIDP RTLGVQLDEK NWAAARALFA LKFKSRTRDQ WTTLLEHSDA
CFAPVLSWTE APEHAHLKAR GTFIEVDGIV QPAPAPRFSA TVPAKPTAPE APGAATVDAA
LAAWLEPDLI GKLKEAGTLA