| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6836 |
|---|
| Symbol | |
|---|
| ID | 6125748 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 934636 |
|---|
| End bp | 935415 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641647843 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001774435 |
|---|
| Protein GI | 170735321 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.394349 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTCTT CGCTTTTCGA CTTGACTGAC AAGGTCGCCA TCGTCACCGG ATCGAGTCGT
GGCATCGGGT ACGCCAGCGC GCTCGGCATG GCCGAGCATG GTGCGAAAGT CGTTATTTCG
GGCCGCAATG GCGACGTCTG CGAAACTGCC GCGCAAGCGA TCAACGAAAG GATCGGCAGC
CGCGCGGCCA TGCCGTTTGC CTGCAACATC GGGCGGAAGG CAGAGCTGCA AAATCTCGTG
GATGCAGCGA ACGGCGAGTG GGGCAGAGTC GATATCGTGA TGGCCAATGC AGCAATTCAT
CCGTGGGTCG GGTCCGTCCT CGACCTGCAG GACGAGACGT TCAACAAGTT CATGCAGGTC
AACGTGCAGA GCAATATCTG GCTCGCTCAG ATGACCATGC CCGGCATGAT CGAGCGCGGC
TATGGCCGCT TCATTTCTGT AGCCTCGGTG GTCGGCCTGT TCGGCGACCC CGTGACGGGA
ACGTATGGGC TCACCAAGGC CGCGGACATG CAACTGGTGC GAAATCTCGC GACTGAATTC
GCCGCGAAGG GCATCACGGC CAACTGCATC GCGCCCGGAA CCTTCAAGAC CGAAATGGCG
CGTTCGCAAT GGGAGGATGA CGCGATGGTC GAGTGGTACC GTGGCCGCAA TCCTTCGCAA
CGCTTCGGCG AGGTTGAGGA GATCGCCGGG CTTGCCGTCC TGCTGGCTTC ACCGTCGGGT
GGCTATATCA ACGGTCAGAC GATCGCGGTG GACGGCGGCC ACACGATCTC GTTTCGCTAA
|
|---|
| Protein sequence | MRSSLFDLTD KVAIVTGSSR GIGYASALGM AEHGAKVVIS GRNGDVCETA AQAINERIGS
RAAMPFACNI GRKAELQNLV DAANGEWGRV DIVMANAAIH PWVGSVLDLQ DETFNKFMQV
NVQSNIWLAQ MTMPGMIERG YGRFISVASV VGLFGDPVTG TYGLTKAADM QLVRNLATEF
AAKGITANCI APGTFKTEMA RSQWEDDAMV EWYRGRNPSQ RFGEVEEIAG LAVLLASPSG
GYINGQTIAV DGGHTISFR
|
|---|
| |