| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6800 |
|---|
| Symbol | |
|---|
| ID | 6125715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 900642 |
|---|
| End bp | 901421 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641647810 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001774402 |
|---|
| Protein GI | 170735288 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.8606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TGCTTCAGTC GCTGTGCGTG GGCGCGGCAC TGCTCGGATC GGTCGCGCAT
GCCGAGCAGG TCGTGCGCGT CGGCACGCTC GCCGATTACG CGCCGTTCGA ATACAAGGAT
GCATCGGGCA AGCTGCAGGG CATGGAGATC GACATCGGCA AGAAGATGTG CGACACGATG
AAGGTCAAGT GCCAGTGGGT GACGATGGAT TTCGACGCGC TGATTCCGGC GCTCAAGGCG
AAGCAGATCG ATGCGGTGCT CGCGCAGATG TCGAAGACGC CCGAGCGCGA GCAGTCGGTC
GATTTCACGC GCATCTTCAC GACGGCACCG GTGCAGTTCG TCGCGAAGCA GGGCTCGGGT
ATCACGGATG GCGCGGCCAC GCTGCGCGGC AAGACGATCG GCGTTCAGAC CGCGTCGACC
CACGAATCCT ATCTGCGCCG CCGCCTGCCG GCGGGCAAGT CGGGGATCAA CGTGAAGGTC
TATCAAACGC TCGACGAGGC CTGGCTCGAC CTGGAGGCCG GACGTGTCGA TGCCGTGCTT
GCCGACAACA CGGTCGCGTA CGACTGGCTG ACGAAGGCCG GCAGGAAGGA AGGTTTCGAC
TTCGTCGGCA AGCCGATCGC CGATGCGGAG ATCTTCGGCG ACGGTACGGC GATCGCGGTA
CGCAAGGGCG ACGCGCCGCT GAAGGCGCTG TTCGACAAGG GGATCGCGCA GGTGCAGGCG
GATGGCACGT TCGCCGCCGC CAACAAGCGC TATTTCCCGT TCAGCATCGC GCCGCAATAG
|
|---|
| Protein sequence | MKKLLQSLCV GAALLGSVAH AEQVVRVGTL ADYAPFEYKD ASGKLQGMEI DIGKKMCDTM
KVKCQWVTMD FDALIPALKA KQIDAVLAQM SKTPEREQSV DFTRIFTTAP VQFVAKQGSG
ITDGAATLRG KTIGVQTAST HESYLRRRLP AGKSGINVKV YQTLDEAWLD LEAGRVDAVL
ADNTVAYDWL TKAGRKEGFD FVGKPIADAE IFGDGTAIAV RKGDAPLKAL FDKGIAQVQA
DGTFAAANKR YFPFSIAPQ
|
|---|
| |