Gene Bcenmc03_6797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6797 
Symbol 
ID6125712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp897228 
End bp898307 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content68% 
IMG OID641647807 
Producthomoserine dehydrogenase 
Protein accessionYP_001774399 
Protein GI170735285 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0460] Homoserine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.401821 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCA AACTGGCACT GGTCGGTTTC GGCGGAGTCA ATCAGGGACT GGTCGAACTG 
CTCAAAAAGA AGCGCGCGAT GCTGGGTGCG GCGGAACTCG ACGTATCGGT GACGATGGTC
GCCGATCTGC GACTCGGGAT CGCGACGAAT CCTCGCGGTA TCTCGTTGGA CGTCCTCGAC
GAAACCGCTC GGCGGGGCGT CGATGCCGAA GCGCTGCGCC GCGATCCCGG CACGCTGGTG
TCGTCGGACG TCGGCCTCGG CGCCGTGCTG AAGGCCATTG CGTCGGACCA CGTGGATGTC
GTCATCGAGG CGACCTTCAC CGATCCGAAC ACCGGCGAGC CCGCGCTGTC GCATTGCCGT
ACCGCACTCG AATGCGGCAA GCACGTGATC ACGACGAACA AGGGGCCGAT CGCGCTCGCG
CAGCCGGCAC TGGCGCGGAT CGCCGCGCAA TCGGGTGCTT GCGTGATGTA CGAGGGCACG
GTGATGAGCG GCACGCCGGT GCTGCGGCAG CTTGCGACCT CGCTGCGCGG TTGCGACATC
AACGGCTTCG CCGGCATCCT GAACGGTACG TCGAACTACG TGCTCGGCGA GGTCGAGGCC
GGCGCGAGCT TCGATGCGGC GATCCGGGAT GCGCAGCAGC GCGGCTATGC GGAGGCGAAC
CCCGCGGCCG ACGTCAACGG GTCGGACGTG CAGCTGAAGG TCGTGATTCT GGCGAACGCG
CTGTGGAACG CTGGCCTCAC GCGTGGCGAC GTGACGTGCC GCGGCATCGT GGAGCTGACC
GAGCACGACG TGCGCGCGGC GGCGGCGGAG GGCATGTCCT GGCGGTTGAT CGGCTCGGCC
GTCCGCCATC CGGACGGCAC CGTGACCGCG AGTGTCGAGC CGCGCAAGCT GCCGGCCGGC
CATCCGTTGC GTGCCGCGAG CGGCGTGACG AATGCGATCA CGTTCGACAC CGACGTGCTC
GGCGGCGTGA CGATCAGCGG GCCCGGTGCG GGGCGCGAGG AAACGGCGTT CGCGATCCTG
TCCGACCTGA TCGAACTCGC CGACAGGATC GGCGCCGTGT CGCACGAGGT GGCCGCATGA
 
Protein sequence
MELKLALVGF GGVNQGLVEL LKKKRAMLGA AELDVSVTMV ADLRLGIATN PRGISLDVLD 
ETARRGVDAE ALRRDPGTLV SSDVGLGAVL KAIASDHVDV VIEATFTDPN TGEPALSHCR
TALECGKHVI TTNKGPIALA QPALARIAAQ SGACVMYEGT VMSGTPVLRQ LATSLRGCDI
NGFAGILNGT SNYVLGEVEA GASFDAAIRD AQQRGYAEAN PAADVNGSDV QLKVVILANA
LWNAGLTRGD VTCRGIVELT EHDVRAAAAE GMSWRLIGSA VRHPDGTVTA SVEPRKLPAG
HPLRAASGVT NAITFDTDVL GGVTISGPGA GREETAFAIL SDLIELADRI GAVSHEVAA