Gene Bcenmc03_6789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6789 
Symbol 
ID6125704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp888413 
End bp889099 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content66% 
IMG OID641647799 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001774391 
Protein GI170735277 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.356042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACAAAC TCGCTCTTGC GCTCGCACTC TCCGCAACGG CCCTCGCCGC GTGCTCCACC 
GCATCCGGCC CGACCTTCAG CGCCTCCGAA CTGCAGCCGC GCGACGGCGT GCGTACCTTC
CAGGTGGACT GCCACGGCCT GCTGTCGGGC CCGCAGACCT GCATGAAGGC CGCCCGCAAG
ATTTGCGGCG AAGCGCCCGT GCGCGCCGTC GACTCGGCCC GCGCGCTGCG CGACAAATCC
GATCCCGCGA CGCTCGTCTT CCAGTGCGGC GACGGGAATG CACAGGCATC TACCGTGGAC
ACGGGTGCGC CGCCTCCGGC CGCCGTTGGT GCGCCGATAC CGAAACGAGT GACGCTGTCA
GGCGACGCGA ACTTCGACTT CAACCAGGCG ATACTGACGC CGGCGGCGAT GCAGCAGCTC
GACAAGGTGA TCGCGAACGG GAAGGGCATG ACTTTCGGAA CCGTCGGCAT CAGCGGCTAT
ACCGATGGGC TCGGCACGGA CACTTACAAC CGTCGGTTAT CAGAGCAGCG TGCGCAGGCC
GTGGCGAGCT ATCTGCAAGC GCACGGACTG AATGCGAGGC GATTTGAGAT CCACGGATAC
GGGGCGGAAC GCCCCGTCGC GTTGAACAAC ACGGCGCTAG GTCGTGCACA GAATCGTCGC
GTCGAGATTG TCCTGCCCGA GATGTAA
 
Protein sequence
MNKLALALAL SATALAACST ASGPTFSASE LQPRDGVRTF QVDCHGLLSG PQTCMKAARK 
ICGEAPVRAV DSARALRDKS DPATLVFQCG DGNAQASTVD TGAPPPAAVG APIPKRVTLS
GDANFDFNQA ILTPAAMQQL DKVIANGKGM TFGTVGISGY TDGLGTDTYN RRLSEQRAQA
VASYLQAHGL NARRFEIHGY GAERPVALNN TALGRAQNRR VEIVLPEM