Gene Bcenmc03_6744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6744 
Symbol 
ID6125665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp833422 
End bp834474 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content61% 
IMG OID641647760 
Productexopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 
Protein accessionYP_001774352 
Protein GI170735238 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID[TIGR03022] Undecaprenyl-phosphate galactose phosphotransferase, WbaP
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGGAT TCTTCTTGCG CGTGATCGAC GGCGCGTTGA TCGTGGTCGG CGCCCTTGGC 
GCATTGCATT TCGGGTTTCC GGCCGACAGC CTGTCGTACA CCGGATTCGA TGGCTTGCTC
GTGGCTTTCG CGGTTGCGCT CGCGTTGTCC GTGTTTCCCG CATGCGGGTT GTATCGCGGC
ACGCGCGAAC GCTCGGCGGT CAACCTGATG AGTCGGGCGA TCGTCGCCTG GCTTATCGTG
CAGGCCGGCG GATACGCATT GCTCTTCGTA TTGCACCGAT TGCATCTGGT GCGCGGACTA
TGGTTCGTCT ACTGGACGAT CATAAGCGGG CTCGGGATGT TGCTGGCACG CACGCTCGCG
CTCGCGGTGC TCAAGCTGTT CGTGCGCTTC GGCCGGCGGG CGCGCAGTGT GGCGGCGCAG
GGGCCGGTCG TGGCCTCTCG AATGATGCGG CTCGCGTTCA AGCGCGTTTT CGATCTCGCG
CTTTCGATTC CGCTCCTTTT TATTCTGGCT CCATTATTCG TCATACTAAT TATTATTGTG
AAGCGCGATG GTGGTCCGGC AATCTTCGGG CACGTCCGCG TCGGCCGTGA CGGAACACGC
TTTCGGTGTC TGAAATTCCG CACGATGGTC GTCGATGCCG AGGAAGTATT GCGAGAAACA
CTCGCCCGCG ATCCGGAAGC GCGCGCCGAA TGGATGAGGG ATTTCAAGCT GAAGAACGAC
GTGCGCATCA CTCCGGTCGG TCATTTCCTG CGACGGACCA GCCTCGACGA ATTGCCTCAG
CTGTGGAACG TGCTGCGCGG CGAAATGAGC TTGGTAGGCC CGCGTCCCAT CGTCGATCAG
GAACTCGCCC GCTATGGCAG TGACGCGCAC TACTACCTCA TGAGCACGCC CGGCATTACC
GGGCTATGGC AAGTGAGCGG CCGCAGCAAT GTCGATTATG CGCAGCGCGT ATCGCTCGAC
GTGTCGTACG TGAAGCAATG GTCGCCACTG CTCGACTTCG GCATCTTGCT GCGAACCGTC
AAGGTCGTGA TGCGACGGGA GGGGGCGTAC TGA
 
Protein sequence
MDGFFLRVID GALIVVGALG ALHFGFPADS LSYTGFDGLL VAFAVALALS VFPACGLYRG 
TRERSAVNLM SRAIVAWLIV QAGGYALLFV LHRLHLVRGL WFVYWTIISG LGMLLARTLA
LAVLKLFVRF GRRARSVAAQ GPVVASRMMR LAFKRVFDLA LSIPLLFILA PLFVILIIIV
KRDGGPAIFG HVRVGRDGTR FRCLKFRTMV VDAEEVLRET LARDPEARAE WMRDFKLKND
VRITPVGHFL RRTSLDELPQ LWNVLRGEMS LVGPRPIVDQ ELARYGSDAH YYLMSTPGIT
GLWQVSGRSN VDYAQRVSLD VSYVKQWSPL LDFGILLRTV KVVMRREGAY