| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6723 |
|---|
| Symbol | |
|---|
| ID | 6125645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 811892 |
|---|
| End bp | 812668 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641647740 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_001774332 |
|---|
| Protein GI | 170735218 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGAA AGATATTGAT CACGGGTGCC AGTTCAGGCT TTGGTCGGGG TGCGGCAATT
GAACTTGCGC GCCTTGGCCA TCAGGTCGTC GCGACGGCCG AGACGTGGCC GCAGGTTCGC
GGCCTGCGTG CGGATGCAGC GGAGGCCGGT GTGGTGCTGG AAGTGATCAA GCTGAATCTG
CTCGACGCGA TCGACATCGC TCACGCGGGC TCGTTCGATC CCGACGTCCT GGTGCTGAAC
GCTGGCGTCA TGGAAGGCGG ATCGATCGTC GACATCCCGA TGCAACGCGT TCGGGAGTCC
TTCGAAATCA ACGTTTTCGG CCATCTTCAA CTGGTGCAGG CGATCGTGCC GAAGATGGTG
GGGCGCAGGT CCGGAAAAGT CGTATGGACC TCCTCGATGG GGGGCATTCT GGTTGTCCCG
TTTGTCGGTG CCTACTGCGC GACCAAGCAT GCGATCGAGG CCATCGCCGG ATCGATGAAA
GCGGAACTCG AACCCTTTGG CGTCAAGGTC GCAACCGTGA ATCCGGGCGT TTTCGGCACC
GGATTCAACG ACACCGGCGC CGAGAGCTAC GTGCAGTGGT ACGACGCCGA TTCCGCCGTT
GTGCTGATGC CGGATTTCGG CGACAGCCTG ATGAACCAGG CCGACCCCAA GGAGATGATC
GACGCCATGG TCGAGATCAT TCAGGCCGAT ACGCATTTGT ATCGAACCAT GCGCCCGTTT
GCGACGATTG ACGCGGCGAA GCAGTGGCAA GAGACGGAGT GGACGCAAAA TGCCTGA
|
|---|
| Protein sequence | MSRKILITGA SSGFGRGAAI ELARLGHQVV ATAETWPQVR GLRADAAEAG VVLEVIKLNL
LDAIDIAHAG SFDPDVLVLN AGVMEGGSIV DIPMQRVRES FEINVFGHLQ LVQAIVPKMV
GRRSGKVVWT SSMGGILVVP FVGAYCATKH AIEAIAGSMK AELEPFGVKV ATVNPGVFGT
GFNDTGAESY VQWYDADSAV VLMPDFGDSL MNQADPKEMI DAMVEIIQAD THLYRTMRPF
ATIDAAKQWQ ETEWTQNA
|
|---|
| |