Gene Bcenmc03_6685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6685 
Symbol 
ID6125607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp762236 
End bp763201 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content70% 
IMG OID641647697 
ProductAraC family transcriptional regulator 
Protein accessionYP_001774294 
Protein GI170735180 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.745893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.261527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGG TCGTGGGTAT TTTCGCCGTT CCGGGTATGC AACTGCTCGA CGTCTCCGCG 
CCGCTCGACG TGTTCGCGCA AGCGAACGTC GAATGCGGGA AGCCGTTCTA TACGCCCCGG
ATCATCGCGA GCGGGCCCGG GCCGGTCCGC AGTTCGTCCG GCGCACGACT GCTGCCCGAC
TGGATCGCGC CCGACATCCC CGAGCGCATC GACACGCTGC TGATCGCCGG CGCGCCGCAC
GCCGGCCAGA TCCTGCTGCG CACGGACGTC CTTGCATGGC TGCGCTCGGC GGCCGTGCAA
AGCAGGCGCT ACGGCTCGAT CTGCACCGGC GCGTTCATCC TTGCGGCCAC CGGCCTGCTG
AAAGGGCGTC ACCTGACCAC GCACTGGGCC GCCGCCGAGG CATTCGCGCA AGCGTATCCG
TCCGTCGCCG TCGACGCCGA CGCACTGTAC GTGCGCGACG GCAAGCTGCG CACCGGCGCC
GGCGTCACGG CCGGGCTCGA TCTCGCGCTC GCGCTGGTCG AGGAGGATCT CGGCCGCGAG
ATCGCACGAC GCGTCGCCGC GCAACTGGTG ATGTTCTTCA AGCGTCCGGG CGGGCAGCTC
CAGTTCAGCC GCAAGGGCGA GGCGCGGCCC GCCGGGCGTT CGGTGCTGCA GGAAGTCCAG
CGCTGGATCG CGGCGCATCC GGAACTCGAG CATTCGGTGG CCGACATGGC GAAGCATGCG
GGCATGAGCC CGCGCCATTT CGCACGGCTG TTCCGCGCGG AAGTCGGCAT GACGCCGGCC
GCATGGGTGG AGGCGACGCG CATCTCGGTT GCCCGCCAGC TACTCGAGGA CGGCCGCGAC
ACGCCGAAGC AGGTCGCCGC GAAATGCGGT TTCGCGAACG TCGATACGCT CAGGCGGGCG
TTCACCCGGC ATGTCGGCAT CACACCCGCC GAATACCGGA AACGGCAGGT GACGCTGGCT
GCGTGA
 
Protein sequence
MPKVVGIFAV PGMQLLDVSA PLDVFAQANV ECGKPFYTPR IIASGPGPVR SSSGARLLPD 
WIAPDIPERI DTLLIAGAPH AGQILLRTDV LAWLRSAAVQ SRRYGSICTG AFILAATGLL
KGRHLTTHWA AAEAFAQAYP SVAVDADALY VRDGKLRTGA GVTAGLDLAL ALVEEDLGRE
IARRVAAQLV MFFKRPGGQL QFSRKGEARP AGRSVLQEVQ RWIAAHPELE HSVADMAKHA
GMSPRHFARL FRAEVGMTPA AWVEATRISV ARQLLEDGRD TPKQVAAKCG FANVDTLRRA
FTRHVGITPA EYRKRQVTLA A