| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6680 |
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| Symbol | |
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| ID | 6125602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 754563 |
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| End bp | 755801 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641647692 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001774289 |
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| Protein GI | 170735175 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.231623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.121297 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCG AACGGGTTCC ATACCGCTTA ATCACTGCCG CAACGGCCGC CGTTTTCCTG
GCCGCGTGCG GGAAAAAAGA ATCGGCGCCG CCGCCGCAAA CGCCGGAAGT CGGCGTCGTC
ACCGTCCAGC CGCAAGCCGT GCCGGCGGTG ACCGAACTGC CGGGCCGCAC CAGCGCGTTC
CTGGTCGCGC AAGTGCGTGC GCGGGTCGAC GGCATCGTGC TGCGCCGCGA ATTCACTGAA
GGCACCGACG TCAAGGCCGG TCAGCGCCTG TACAAGATCG ATCCGGCGCC GTACATCGCG
GCCCTGAACA GCGCGAAGGC GACGCTCGCG AGGGCGCAGG CGAACCTCGT CACGCAGAAC
GCGCTGGTCG CGCGCTACAA GGTGCTGGTG GCCGCGAACG CGGTCAGCAA GCAGGATTAC
GACAACGCGG TCGCCACCCA AGGCCAGGCC GCGGCGGACG TCGCGGCCGG CAAGGCGGCG
GTCGATACCG CGCAGATCAA CCTCGGCTAT ACGGATGTCG TCTCGCCGAT CAGCGGCCGC
GTCGGCATCT CGCAAGTGAC GCCGGGCGCA TACGTGCAGG CGAGCCAGGC GACGCTGATG
TCGACCGTGC AGCAGCTCGA TCCGGTGTAC GTCGACCTCA CGCAGTCGAG CCTCGAAGGG
CTGAAGCTGC GCCAGGACGT GCAGAGCGGC CGTCTGAAGA CGAGCGGCCC GGGCGCGGCG
AAGGTGTCGC TGATCCTCGA GGATGGCAAG ACCTACTCGG AGCCGGGCAA GCTGCAGTTC
TCGGACGTGA CGGTCGACCA GACCACCGGC TCGGTGACGA TCCGCGCGGT GTTCCCGAAC
CCGAACCGCG TGCTGCTGCC GGGCATGTTC GTGCGCGCAC GGATCGAGGA AGGCGTGAAC
GAGAACGCGT TCCTGGTGCC GCAGATCGGC GTCACGCACG ATCAGAAGGG GCAGGCGATC
GCACTCGTCG TGACCGCGGC CAGCAAGGTC GAGATGCGTC CGTTGACGAC GACCGGCACG
TACGGTCAGA ACTGGATCGT CGAAGGCGGT CTGCAGGCGG GCGATCACGT GATCGTGCAA
GGCGTCGACA AGGTGCGCCC GGGCGCGACC GTGAAGACCG TCGCCGCGCA GCTCGCCCCG
GCGCCGGACG CCGCATCCGC CACGTCGGCA GGCGCCGCGC CGGCGAGTAC CGCGACGAGT
GCCGCAGCGA GTTCGGTCGC CGCGTCGAGC GCGCAATAA
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| Protein sequence | MRVERVPYRL ITAATAAVFL AACGKKESAP PPQTPEVGVV TVQPQAVPAV TELPGRTSAF
LVAQVRARVD GIVLRREFTE GTDVKAGQRL YKIDPAPYIA ALNSAKATLA RAQANLVTQN
ALVARYKVLV AANAVSKQDY DNAVATQGQA AADVAAGKAA VDTAQINLGY TDVVSPISGR
VGISQVTPGA YVQASQATLM STVQQLDPVY VDLTQSSLEG LKLRQDVQSG RLKTSGPGAA
KVSLILEDGK TYSEPGKLQF SDVTVDQTTG SVTIRAVFPN PNRVLLPGMF VRARIEEGVN
ENAFLVPQIG VTHDQKGQAI ALVVTAASKV EMRPLTTTGT YGQNWIVEGG LQAGDHVIVQ
GVDKVRPGAT VKTVAAQLAP APDAASATSA GAAPASTATS AAASSVAASS AQ
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