| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6616 |
|---|
| Symbol | |
|---|
| ID | 6125539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 679604 |
|---|
| End bp | 679975 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641647629 |
|---|
| Product | LrgA family protein |
|---|
| Protein accession | YP_001774226 |
|---|
| Protein GI | 170735112 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1380] Putative effector of murein hydrolase LrgA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.112454 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCAGG CATTCGCGGT CTTGCTGATC TTCCAGTGTC TCGGGGAAGG CGTGTCCTAT
CTGTTTGGCC TGCCGGTGCC GGGCCCCGTG ATCGGCATGC TGCTGCTGTT CGGCTTCGTG
ATGCTGCGCC CGCAGGTCGC CGATGCGATC GAGCCGACCG CGCTCGAGCT GCTGCGTCAC
CTGTCGCTGC TGTTCGTGCC GGCCGGCGTC GGCATCATGG TGTCGGCCGA TCGCGTGCGC
GGCGACGCGG TCGCGGTCGT CGTCGCGCTG GCCGTCAGCA CCACGCTCGC GATCGGGGTG
ACGGCGCTCG TCACGCGCGC GCTGCTGCGG CGCCAGCGCC GCGCGGGCGG CACCGCGGAG
GGCGCGCAAT GA
|
|---|
| Protein sequence | MLQAFAVLLI FQCLGEGVSY LFGLPVPGPV IGMLLLFGFV MLRPQVADAI EPTALELLRH
LSLLFVPAGV GIMVSADRVR GDAVAVVVAL AVSTTLAIGV TALVTRALLR RQRRAGGTAE
GAQ
|
|---|
| |