Gene Bcenmc03_6615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6615 
Symbol 
ID6125538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp678873 
End bp679607 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID641647628 
ProductLrgB family protein 
Protein accessionYP_001774225 
Protein GI170735111 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID[TIGR00659] conserved hypothetical protein TIGR00659 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.918495 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.128036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGT TCCCGAAGCT CGGCGCGATC TGGGTCTATC TCGCCGCGAG CCCGCTGCTG 
GGCCTGACCA TCACGCTGGT CGCGTATCTG TTCGCGCAGG CCGTCTATGC GCGGGCGCGT
TTCAATCCGC TGGCGAATCC GGTGCTGATC GCGGTCGCGG TGATCGTCGT GCTGCTGACG
CTCACGCATA CGCCGTATCC CACGTATTTC GAAGGCGCGC AGTTCGTCCA CTTCCTGCTC
GGCCCGGCGA CCGTCGCGCT CGCGCTGCCG CTATACCGCC AGTGGTCGAA GCTGCGGCGC
ACCGCGTTGC CGCTGCTCGT CGGCCTGCTC GCGGGTTCGC TGACCGCGAT CGTGTCGGCG
GTCGGTATCG CCGCGCTGTT CGGGGCGTCC CATCAGACGA TCGCGTCGCT CGCGCCGAAA
TCGGCGACGA CGCCGATCGC GATGGCCGTC GCCGCGGAGA TCGGCGGCAT TCCGTCGCTC
ACGGCCGTGC TCGTGATCTC GACCGGGATT TTCGGCGCGG TGTGCGCGCG CGCGATCCTC
AATCTGCTGA GGATCGACGA GCCGGCCGTG CGCGGCTTCG CGCTCGGCGT CGCGTCGCAC
GGAATCGGCA CCGCGCGCGC GTTCCAGGTC AGCGAGGAAG CCGGCGCGTT CGCCGGGCTC
GGGATGGGGC TGAACGGCGT GCTGACGGCG TTCGTCGTGC CGATTCTGCT GCCGGTGCTG
TCGCGCTGGA TCTGA
 
Protein sequence
MTAFPKLGAI WVYLAASPLL GLTITLVAYL FAQAVYARAR FNPLANPVLI AVAVIVVLLT 
LTHTPYPTYF EGAQFVHFLL GPATVALALP LYRQWSKLRR TALPLLVGLL AGSLTAIVSA
VGIAALFGAS HQTIASLAPK SATTPIAMAV AAEIGGIPSL TAVLVISTGI FGAVCARAIL
NLLRIDEPAV RGFALGVASH GIGTARAFQV SEEAGAFAGL GMGLNGVLTA FVVPILLPVL
SRWI