Gene Bcenmc03_6609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6609 
Symbol 
ID6125532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp673388 
End bp674485 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content71% 
IMG OID641647622 
ProductLacI family transcription regulator 
Protein accessionYP_001774219 
Protein GI170735105 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.376119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.423679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CCCCGTCCCG CGGCGGCGCA TCGCGGGCAC GCCGCGGCAG CGGCCGCTCG 
GTGCTCGGCG ACGTCGCGAA ACTGGCCGGC GTGTCGACCG CGACCGTCTC GCGCGTGTAC
AACGACCCCG GCAAGGTGTC GGCCGACGTG CAGCAGCGCG TGCGCGACGC GGCGCTCGCG
CTGAACTGGA TTCCGAATGC GGCCGGCCGC GCGCTGGCGT CCACGCGTAC CCACATTACC
GGCGCGATCA TTCCGACCCT CGACGACCAG GTGTTCGCGT CGCAGGTCGC CGGCATGCAG
ACGATCATGG CCGGGCACGG CATCACGCTG TTCCTCGGCT GTTCGAACTA CGACCCCGCG
CAGGCGCTCG CGCAGGTGCG CGCGATGCTG TCGCGCGGCG TGGAAGCGGT GTCGCTGGTC
GGCGAAGCGT ACCCGCCCGA ACTGTTCGAA CTCCTTGCGA TGCATCGCGT GCCGTACGTC
GTCACGTATG CGTACCGCGA CGACAGCCCG CACTGCTGCA TCGGCTTCGA CAACCGCGCG
GCGTTCGCAC GGCTCACCGC ATACCTGCTC GACCTCGGCC ATCGCGATTT CGCGATCATC
ATGCAACCGT CGACGGACAA CGACCGTGTC CAGGCCCGCC TGCGCGGCAT TCACGACACG
CTGGCCGCGC ACGGGCTCGC GGTGCGCCCC GTGCATCAAC ACGAAGGCGC GGCCACGATC
GCGTTCGGGC GGGCGAGCTT GCGTGCGATC GCCGGCAGCG ATGCGGCGAC GCGGCCGACC
GCCGTGATCT GCGGCAACGA CGCGCTCGCG CTCGGCGCGT TGCTCGAAGC GCAGGCGCTC
GGCATCGACG TGCCCGCGCA GTTGTCGATC ACCGGGTTCG ACGACGTCGC GCTCGCGCGC
GAGATCCAGC CGCCGCTGAC GACGATGTGG GTCGACACCG ACGCGATCGG GCGCCAGGCC
GCGCACACGT TGCTCGACGC GCTCGAAAAC GGCGCCACGG GGCCCGGCCA TGCCGTCCAG
CCCGAGTTGC GCATACGGGA ATCGGCTGCG CCGCCGGCGA AGACGCAGAC GCAGGCGCGC
GCGGCACGCA GGAAATAG
 
Protein sequence
MSTPPSRGGA SRARRGSGRS VLGDVAKLAG VSTATVSRVY NDPGKVSADV QQRVRDAALA 
LNWIPNAAGR ALASTRTHIT GAIIPTLDDQ VFASQVAGMQ TIMAGHGITL FLGCSNYDPA
QALAQVRAML SRGVEAVSLV GEAYPPELFE LLAMHRVPYV VTYAYRDDSP HCCIGFDNRA
AFARLTAYLL DLGHRDFAII MQPSTDNDRV QARLRGIHDT LAAHGLAVRP VHQHEGAATI
AFGRASLRAI AGSDAATRPT AVICGNDALA LGALLEAQAL GIDVPAQLSI TGFDDVALAR
EIQPPLTTMW VDTDAIGRQA AHTLLDALEN GATGPGHAVQ PELRIRESAA PPAKTQTQAR
AARRK