| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6607 |
|---|
| Symbol | |
|---|
| ID | 6125530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 670841 |
|---|
| End bp | 672160 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641647620 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001774217 |
|---|
| Protein GI | 170735103 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.806643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.758649 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGACA ACCCACCTGT TCCGCACGCG CCACCCCGGA TTCGGCGCGG TCAACGCATC
GCGCTCGCGC TGTTGATGGC GAGCGGGATC GTCAACTACC TCGATCGCGG CACGCTGGCC
GTCGCGAGTT CGGCGATCCG CGGTGATCTC GGCCTGTCGC TCGCGCAGAT GGGGCTGCTG
CTGTCGGCAT TCTCATGGAG CTATGCGCTG TGCCAGTTTC CGGTCGGCGG GCTGGTCGAC
CGCATCGGTC CGCGCCGGCT GCTCGGCATC GGGTTGATCG TCTGGTCGTT CGCGCAGGCG
TCGGGCGGCC TCGTGTCCAC GTTTGGGTGG TTCATCGTCG CGCGCATCGT GCTCGGCATC
GGCGAGGCGC CGCAATTCCC GTCGGCCGCG CGCGTGGTGA GCAACTGGTT TCCGCTGCGG
GCGCGCGGCA CGCCGACCGG CATTTTCAAT GCCGCGTCGC CGCTCGGTAC CGCGCTTGCG
CCGCTGCTGC TGTCGGTGCT CGTTGCATCG TTCGACTGGC GCTGGGCGTT CATCGTGACC
GGCGCGCTTG GCCTCGTCGT CGCCGTCGTG TGGTTCGCGT TCTATCGCGA TCCGGTGCGC
GCGCAACTAT CTGCCGCCGA GCGCAATTAT CTCGATGCCG ATGCGCAGAG CGTCGCCGCG
GCGCCGAAAC TGACCTTCGC CGAATGGCGC AGCCTGTTCT CGCACGGCAC GACCTGGGGG
ATGCTGATCG GCTTCTTCGG CTCCGTGTAC CTGAACTGGG TGTACCTCAC CTGGCTGCCG
GGCTACCTGA CGATGGAGCG GCACATGAGC CTGATCCGCA CCGGGTTTGC CGCATCGGTG
CCGTTCCTGT GCGGGTTCGT CGGTTCGCTG GTCGCCGGCT GGCTGTCGGA TCTCGTCACG
CGGCGCAGCC GGTCGCCGGT CGTGAGCCGG CGCAATGCGG TGGTGGCCGC GATGCTCGGG
ATGGTCGCAT TCACGATTCC GGCCGCGCTC GTGCAGAGCA ATACGGTTGC GCTCGCATGC
ATTTCGGTGG TGATCTTTCT CGCCAACGCG GCGTCGGCGT GCTCGTGGGC ACTCGCGACG
GCGGCCGCGC CGCCGAGCCG CATCGCGTCG CTCGGCGCGA TCCAGAATTT CGGCGGCTTC
ATCGGCGGCG CGCTGGCGCC GATCCTGACC GGCATCATCG CGCAGAAGTG GTCGTTCGTG
CCCGCGCTGC TCACCGCGGC GGCGATCGCA TTCGCCGGCG CGATGGCCTA CCTGCTGCTC
GTGCGCAAGC CGATTCCCGA ACAGGCCGCG AACGCCGCGC CCGGACCGTT GCCGGCGTAA
|
|---|
| Protein sequence | MKDNPPVPHA PPRIRRGQRI ALALLMASGI VNYLDRGTLA VASSAIRGDL GLSLAQMGLL
LSAFSWSYAL CQFPVGGLVD RIGPRRLLGI GLIVWSFAQA SGGLVSTFGW FIVARIVLGI
GEAPQFPSAA RVVSNWFPLR ARGTPTGIFN AASPLGTALA PLLLSVLVAS FDWRWAFIVT
GALGLVVAVV WFAFYRDPVR AQLSAAERNY LDADAQSVAA APKLTFAEWR SLFSHGTTWG
MLIGFFGSVY LNWVYLTWLP GYLTMERHMS LIRTGFAASV PFLCGFVGSL VAGWLSDLVT
RRSRSPVVSR RNAVVAAMLG MVAFTIPAAL VQSNTVALAC ISVVIFLANA ASACSWALAT
AAAPPSRIAS LGAIQNFGGF IGGALAPILT GIIAQKWSFV PALLTAAAIA FAGAMAYLLL
VRKPIPEQAA NAAPGPLPA
|
|---|
| |