Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6595 |
Symbol | |
ID | 6125518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 655543 |
End bp | 656289 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641647608 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_001774205 |
Protein GI | 170735091 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4160] ABC-type arginine/histidine transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.148887 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCATCG ATTTCGCTTT TCTCCTCGAT ACGCTGCGCC AGCTGCTCGC GGCCGTGCCG ACCACGCTCG GCCTGTTCTT CGCATCGCTC GTGCTCGGCG GCCTGCTGTC GCTCGTGATC GTCACGATGC GCGTGTCGCC GCGCTGGCTG CCGAACCGCT TCGCGCGGGC CTACATCCTC GTGTTTCGCG GCTCGCCGCT GCTGATCCAG ATGTTTCTCG TGTATTACGG GCTCGGCCAG TTCGGCGTGA TCCGCGAGAG CTTCATGTGG CCGCTGCTGC GCGAGCCGTA CGTCTGCGCG GTGCTGTCGC TTGCGCTGTG CACGGCCGGC TACACGGCCG AGATCCTGCG CGGCGGGCTG ATGGCCGTAC CGGTCGGGCA GATCGAGGCC GGGTATTCCA TCGGCCTGTC GGGCTTCTCG CTGCTGCGGC GCGTGATCGG CCCGATCGCG TTGCGCCAGT GTCTACCCGC GTATTCGACC GAAGCGGTGC TGCTCGTCAA GTCGACCGCG CTGGCGAGCC TCGTCACGGT GTGGGAAGTG ACGGGCGTCG CGCAGCAGAT CATTCAGCAA ACCTACCGGA CGACCGAAGT GTTCGTCTGC GCGGCCATCA TCTATCTGGG CCTGAACTTC ATCGTCGTGC GCGTGCTCGG CGCGCTCGAA TGGCGGCTCT CGGGGCACCT GCGTGCGCCG AAGCCGTCCG GCGCGCCCGC CGCGGCGACC CGCAATGCCC GGCGCGTCGC GTCCTGA
|
Protein sequence | MSIDFAFLLD TLRQLLAAVP TTLGLFFASL VLGGLLSLVI VTMRVSPRWL PNRFARAYIL VFRGSPLLIQ MFLVYYGLGQ FGVIRESFMW PLLREPYVCA VLSLALCTAG YTAEILRGGL MAVPVGQIEA GYSIGLSGFS LLRRVIGPIA LRQCLPAYST EAVLLVKSTA LASLVTVWEV TGVAQQIIQQ TYRTTEVFVC AAIIYLGLNF IVVRVLGALE WRLSGHLRAP KPSGAPAAAT RNARRVAS
|
| |