| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6582 |
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| Symbol | |
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| ID | 6125505 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 642592 |
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| End bp | 643503 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641647595 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001774192 |
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| Protein GI | 170735078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.100226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0117418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTTC ATCGCATCCT TCGATCGCTC GCACGCCTGT GCGCCGCCAG TGCGCTGTGC
GTCGCGGCCA GCACGCCGGC ATTCGCCGCG AAGCTCGTGC TGGGCGCGAA GAACTTCACC
GAGCAATACG TGCTCGCGGA ACTCACGTCG CAGTACCTGC GCTCGCGCGG CTACGACGTC
GAAGTTCGCG CCGGGCTCGG CAGTACGCTC GCCCGCAGCG CGCTGGAGAA CGGCCAGTTC
GACCTGATGT GGGATTACAC GGGCACCGCG GCACTCGTCT ACAACAAGAT CCAGGACAAG
CTGTCGCCCG AGGAAATGTA CCGGCGCGTC AAGGCGCTCG ACGTGCCGCG CGGGCTCGTG
TGGCTCGACG CGTCGCCGCT CAACGACACC TACGCGATCG GCCTGCCGAG CCAGCTCGCG
CAGGCCACCG GCATCCGCAC GGTGTCGCAG CTCGCCGAGC ACCTGAAGAC CGATCCGGCG
GCGAAGCATT ACGTGTTCGG CATGGACGCG GAGTTCGCGA ATCGCCCCGA TGGCCTGAAG
CCGCTGCTCG CCGCCTACGG CATGCAGTTC AGCCGCGCGC AACTGAAGCA GATGGACCCG
GGGCTCGTCT ATACGGCCCT GCACAACAAC CAGTTGAAGA TCGGCCTCGT CTATACGACC
GACGGACGCG TGAAGGGCTT CGGCATCGTG CCGCTCGAGG ACGACAGGCA CTTCTTCCCG
CCGTACAACG CGACGCCCGT GGTCCGTCAG GGCACGCTGG CGCACAACCC GAAGCTCGCG
GCGCAGCTCA ACGCGCTGTC GGCCGCGCTC GACAACGATG CGATGCAGGC GATGGCCAAG
GCGGTCGACC TCGACGGCAA ATCGCCGCGC GACGTCGCCG ACGAATTCCT GCGTACCCAC
CCGCTACCTT GA
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| Protein sequence | MTLHRILRSL ARLCAASALC VAASTPAFAA KLVLGAKNFT EQYVLAELTS QYLRSRGYDV
EVRAGLGSTL ARSALENGQF DLMWDYTGTA ALVYNKIQDK LSPEEMYRRV KALDVPRGLV
WLDASPLNDT YAIGLPSQLA QATGIRTVSQ LAEHLKTDPA AKHYVFGMDA EFANRPDGLK
PLLAAYGMQF SRAQLKQMDP GLVYTALHNN QLKIGLVYTT DGRVKGFGIV PLEDDRHFFP
PYNATPVVRQ GTLAHNPKLA AQLNALSAAL DNDAMQAMAK AVDLDGKSPR DVADEFLRTH
PLP
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