Gene Bcenmc03_6575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6575 
Symbol 
ID6125498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp633078 
End bp634286 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content66% 
IMG OID641647588 
ProductABC-type branched-chain amino acid transport system periplasmic component 
Protein accessionYP_001774185 
Protein GI170735071 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0967723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0140332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCGCC GAGAACTGTT GAAACTGGCC GCGCTGTCGG CCGTGCCGGG CGCGCTCGGC 
AGCATGTCGT CCCGGGTCGC GTTCGCGCAG GGCGCGCCCA TCCAGCTCGC ATGCCCGGTG
CCGATGTCCG GCCCGTTCGC CGCCAACGGC AAGTACGCCG ATCTCGGCAT GCAGCTCGCC
GTCAAGCAGT ACGGCAAGGT GCTCGGCGCG CCGCTCGCCT ATACGGCGCT CGACACCGAG
GGCAAGCCCG CGACGGCCGT GCGGCGCGTG CAGGAGATCG CGCAGCAGAA GGGCGTGCGT
TTCTTCGCGG GCGGCATCCT GTCGTCCGAA TCGCTGGCGA TGGGCAAGGA AGTCCAGAAG
GCGGACGGCG TGTTCATCAC GACGGCCGGC GCGGACGAGA TCACCGGCAA GGACTGCAAC
GCGGCGACGT TTCGTTGGTC CGTGCCGACC TTCGGCGCGA TCGAGCAGAC GGTGCGCCCG
TTGATCCAGA TGCTGCCGAA GGCGAAGCGC TGGTACACGA TCACGCCACA ATACGTGTTC
GGCGACGGGC TGCTGTCGGC CGCGAAGGCG GTCTTCAAGG AGAAGGGCAT CGAGCACGTC
GGCAACAGCT ATCACTCGCT CGCCGAGAAG GAGTTCAGCG GCTACCTGAC GAATGCGGCG
GCCGCGCAGC CGGACGTGCT GCTGATCCTG AACTTCGGCT CGCAATCGTC GGACACGCTG
CGTCAGGCCG TCAGCTTCGG GATGAAGCGC AACTGCACGA TCCTGCTCGC GTGGGCGTCG
GGCCTCGAGC AGTTCGCGGC GCTCGGGCCG GACATCTGCG ACGGCGTGTA TTTCGGCGCG
CAGTACTGGC ACGGCATCGA TTCGCCGCTG AACCGCGATC TCGTGAAGCG CGCGAACGCC
GCGTTCAAGG CGAACCCGAA CTACAGCCTC GCGGGCTCGT ACATCTGCTC GAAGATCCTG
ATCGACGCGA TGGTGAAGGC CGGCAGCGCC GATCCGAAGA AGGTCGTCGC GGCGATGGAA
GGGATGAAGT ACGACGGGCT CACGGGTCCG GAGGAAATCC GCAAGGGCGA CCACCAGGTG
CTGAAGAACT ACTACCTGCT GAAGGGCAAG CCGAAGAGCC GGATGAAGAA CGCGGACGAC
TATGCCGACA TCGTCAGCTC CGGCCAGTCG TTCCTGCCGC TCGACAAGAC GGGCTGCAAG
CTCGCGTGA
 
Protein sequence
MNRRELLKLA ALSAVPGALG SMSSRVAFAQ GAPIQLACPV PMSGPFAANG KYADLGMQLA 
VKQYGKVLGA PLAYTALDTE GKPATAVRRV QEIAQQKGVR FFAGGILSSE SLAMGKEVQK
ADGVFITTAG ADEITGKDCN AATFRWSVPT FGAIEQTVRP LIQMLPKAKR WYTITPQYVF
GDGLLSAAKA VFKEKGIEHV GNSYHSLAEK EFSGYLTNAA AAQPDVLLIL NFGSQSSDTL
RQAVSFGMKR NCTILLAWAS GLEQFAALGP DICDGVYFGA QYWHGIDSPL NRDLVKRANA
AFKANPNYSL AGSYICSKIL IDAMVKAGSA DPKKVVAAME GMKYDGLTGP EEIRKGDHQV
LKNYYLLKGK PKSRMKNADD YADIVSSGQS FLPLDKTGCK LA