| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6558 |
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| Symbol | |
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| ID | 6125481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 613687 |
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| End bp | 615081 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641647571 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001774168 |
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| Protein GI | 170735054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.101709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.434882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCG TTCGACTCGT GGCCGCGCTG TCCGCGGCGG CCATCCTGAC CGCGTGCACG
AGCGCGCCGG TCGCCACCGT CACCCCGCCG CCGCTGGCCG CGACCTATGC GAACGCGGAT
CTCGCGGCCG GCGGCCCGGC CGCCGATACC GGTGCGTGGT GGCATGGCTT CCGCGATCCG
ATCCTCGACC GGCTGGTCGA CACCGCGCTC GCGAACAACC TCGACCTGCA GGCGGCCGTC
GCACGCATCG ACGCGGCGCG CGCGGTGCGG ATCGGCGCGG CGTCGCAATG GTTCCCGTCC
GTCGACCTGA ATGCCGGCGC CAGCCGTCAG CGGCAGTCCG CATCGCAGGC GTTCCCGACC
GATACGCCGA CGACCGGCAA CGCGTTCGAC CTGAATGCGA GCCTCGCATG GGAAATCGAC
ATCTTCGGCC GCATCCGCCA GGGGGTGTCG GCAGCCGACG CGGATATCGC GTCGGCGCAA
AACGACGCGG CGGCCGTGCG GATCGCGACG ATCGACGAAA CCGTGCGCAC CTACGTGACG
GTGCGCGGCC TCGAACAGCG GCTCGCGCTG GTCGAGGCCA ACGCGCTGAG CCAGCGCGGC
ACCGAGGAAT CGACACGGCG CCTGTTCGAC GCGGGCGTCG TGCCGATCGC CGACGTCGAC
CGCGCCGCCG CGCAGACGGA AACGACGCTG GCCGAGCTGC CCGCGCTGCA ACTGCAGCGG
CAGGCCGCGA TCCACCGGCT GTCGATCATC ACCGCGTCGA CGCCGCAGGA TATCTATGCG
CGGCTCGACC CGCCCGCGCC CGAGCCGGTG TGGACCGCCG CCGCGCCGGG CATCGGCACG
CCGGCCGACC TGCTGCGCCG GCGGCCCGAC GTGCGCGCGG CCGAGGCACG CGTCGTCGCG
GCCTATGCGC GCATCGGCGT CGCCGAGGCC GACCTGAAGC CGCACCTGCA ACTGATCGGC
GTGATCGGCG CGGCGATCGA CGGTTTCTCG GGCGCGTCGC TCGCACGTTC GCTCGCGTGG
ATGGCCGGCG CCGGCGCGAG CGCGCCGCTG TTCGACGGTG GCCGGCGCCG CAGCGTCGTC
GCGTTGCGGC GCGCGCAGGC CGACCAGGCG CTCGCCGCCT ACCGCACGGC CGTGCTGACG
GCCGTCGGCG ACGTCGAGAC ATCGGTGGCC GCGACCGCCC GAAATCACGG CCGGACCGAG
CGCCTCGAAC GCGCAGTATC GAATGCGCGG GGTGCGTACA CGCAGATCAA CCGGTCGTGG
CGCAGCGGCG AATCGGCGTT CATCGATACG CTGGAAGTGC AGCGTGCGCT GCTCGCGGCC
GAGGATTCGC TCGCACAGGC GCGCACCGAG GAAACGCTGA GCCGGGTCAG GCTGATGAGT
GCGCTGGGGC AGTAG
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| Protein sequence | MKFVRLVAAL SAAAILTACT SAPVATVTPP PLAATYANAD LAAGGPAADT GAWWHGFRDP
ILDRLVDTAL ANNLDLQAAV ARIDAARAVR IGAASQWFPS VDLNAGASRQ RQSASQAFPT
DTPTTGNAFD LNASLAWEID IFGRIRQGVS AADADIASAQ NDAAAVRIAT IDETVRTYVT
VRGLEQRLAL VEANALSQRG TEESTRRLFD AGVVPIADVD RAAAQTETTL AELPALQLQR
QAAIHRLSII TASTPQDIYA RLDPPAPEPV WTAAAPGIGT PADLLRRRPD VRAAEARVVA
AYARIGVAEA DLKPHLQLIG VIGAAIDGFS GASLARSLAW MAGAGASAPL FDGGRRRSVV
ALRRAQADQA LAAYRTAVLT AVGDVETSVA ATARNHGRTE RLERAVSNAR GAYTQINRSW
RSGESAFIDT LEVQRALLAA EDSLAQARTE ETLSRVRLMS ALGQ
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