Gene Bcenmc03_6552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6552 
Symbol 
ID6125475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp605747 
End bp606658 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content68% 
IMG OID641647565 
ProductLysR family transcriptional regulator 
Protein accessionYP_001774162 
Protein GI170735048 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.392727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA TCCGCCAGCT TCAATATTTC ATCGCGGTCG CGGAAGAGGA ACACGTCGGC 
CGTGCGGCCG AACGCCTGCA CATCTCTCAG TCGCCGCTCA GCCGCCAGAT CGCGCAGCTC
GAGGAAAAGC TCGGCCTGAC GCTGTTCGAA CGCAGCCAGC AGCGCATTCG TCTGACGCGT
GACGGGCGCA CGTTCCTCAG CGAAGCGCAC GCGTTCCTGC GCCATGCGAA CCGGCTCGAA
TCGCTCGCGC GCCGGCTCGG CCGCGGCGAC GAAGGCGGCC TGTGCATCGG CTACCTGGAA
ACGGCCACCC ACTCGGGCGT GCTGCCGCGT GCGCTGAAAA CGCTGCGCGC CGAGCGCCCG
TCGGTGCATA TCGCGCTGTA CAACTATCCA TCCGCCGCGC AGCTCGAAGG CCTGCGCGAA
CGCAGCCTCG ACATCGCGCT CGTGACCGAG CCGCCCGCGC CGGACGATCC CGAACTCGAT
TCGACGATGG TGCTGAACGA TCCGATGCTG CTCGCGCTGC CCGACGGACA CCCGCTCGCG
AAGAAGAAGA CGCTGAGCGC CGACGATCTC GCCGCACAAG CGTGGATCGG CGTCACGCAG
CAGGAAAGCG CGCCGCGGCA CGGCGCATTC GTGGCGGCCT GTGCGAAGGC CGGTTTTTCG
CCGGACATTT CGGTGGAAGC GACCGAACCG CTCGCGGCGC TCGGGCTCGT CGCCGCGGGG
CTCGGCGTGA CGATGATCCA GCAAAGCCTG CGTCACCAGG TGCCGGAAGG CGTCGTGCTG
CGCGAGCTGC CGTGGTTCAG CTACCGCACG CCGCTGTGGG CTGCGTGGCA CAAGGTCAAC
CTGCGACCGC TGGTCGGCAT CTTCCGCGAG ATCCTGACCG GCGAGGAGGT CGTCGCGGCA
GCTGGAAAAT GA
 
Protein sequence
MLDIRQLQYF IAVAEEEHVG RAAERLHISQ SPLSRQIAQL EEKLGLTLFE RSQQRIRLTR 
DGRTFLSEAH AFLRHANRLE SLARRLGRGD EGGLCIGYLE TATHSGVLPR ALKTLRAERP
SVHIALYNYP SAAQLEGLRE RSLDIALVTE PPAPDDPELD STMVLNDPML LALPDGHPLA
KKKTLSADDL AAQAWIGVTQ QESAPRHGAF VAACAKAGFS PDISVEATEP LAALGLVAAG
LGVTMIQQSL RHQVPEGVVL RELPWFSYRT PLWAAWHKVN LRPLVGIFRE ILTGEEVVAA
AGK