Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6551 |
Symbol | |
ID | 6125474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 604672 |
End bp | 605454 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641647564 |
Product | extracellular solute-binding protein |
Protein accession | YP_001774161 |
Protein GI | 170735047 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.683047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGC GCCTCACGAT TCTCCTGTCC GCCGCCGCGA TGGCCTTCGC GTCGCTGGCG TCGGCGAAGG AATGGACGAC CATCCGCATC GGCGTCGACC CGACCTACCC GCCGTTCGAA TCGACCGCGA CCGACGGCAG CGTGAAGGGC TTCGATATCG ATCTCGGCAA CGCGCTGTGC GCGAAGCTGA AGGCGAAATG CGTGTGGGTG TCGAGCAGTT TCGACGGGCT GATTCCGGGG CTGCAGGCGC GCAAGTTCGA CGTGATCCTG TCGTCGATGG CCGCGACCGA ACAGCGGCGC CAGCAGATCG ACTTCACCGA TCGCCTGTAC CGCAACCAGA CGCGGCTGAT CGCGCGCACC GGGTCCGGGC TGCTGCCGGA CGCGGCGAAG CTCGCCGGCA AGCGCGTCGC GGTCGAACAG GGCACGGTCC AGGAAACCTA TGCGCGTGAG AAGTGGGCGC CCGCGAAGGT CGAGGTCGTG CCGTATCCGA GCTACGACCA GGCGTATGCG GACCTCGTCA CCGGGCGCGT CGACGGCGTG CTGATGGACG CCGTGCAAGG CCAGCTCGGG TTCCTCGCGA CGCCGCGCGG CAAGGGCTTC TCGTTCGCGG GCGGCGTGGT GTACGACGCG AAGATCATGG GCAACGGCGA TGCGGCCGGC GTGCGCAAGA CCGACACCGA CCTGCGCGAC GCGCTGAATC GCGCCATCGC GCAGATTCGC GGCGACGGCA CCTACAACAC GATCCAGGCG AAATATTTCG ACTTCGACAT GTACGGGAAC TGA
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Protein sequence | MKTRLTILLS AAAMAFASLA SAKEWTTIRI GVDPTYPPFE STATDGSVKG FDIDLGNALC AKLKAKCVWV SSSFDGLIPG LQARKFDVIL SSMAATEQRR QQIDFTDRLY RNQTRLIART GSGLLPDAAK LAGKRVAVEQ GTVQETYARE KWAPAKVEVV PYPSYDQAYA DLVTGRVDGV LMDAVQGQLG FLATPRGKGF SFAGGVVYDA KIMGNGDAAG VRKTDTDLRD ALNRAIAQIR GDGTYNTIQA KYFDFDMYGN
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