Gene Bcenmc03_6551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6551 
Symbol 
ID6125474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp604672 
End bp605454 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID641647564 
Productextracellular solute-binding protein 
Protein accessionYP_001774161 
Protein GI170735047 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID[TIGR01096] lysine-arginine-ornithine-binding periplasmic protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.683047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACGC GCCTCACGAT TCTCCTGTCC GCCGCCGCGA TGGCCTTCGC GTCGCTGGCG 
TCGGCGAAGG AATGGACGAC CATCCGCATC GGCGTCGACC CGACCTACCC GCCGTTCGAA
TCGACCGCGA CCGACGGCAG CGTGAAGGGC TTCGATATCG ATCTCGGCAA CGCGCTGTGC
GCGAAGCTGA AGGCGAAATG CGTGTGGGTG TCGAGCAGTT TCGACGGGCT GATTCCGGGG
CTGCAGGCGC GCAAGTTCGA CGTGATCCTG TCGTCGATGG CCGCGACCGA ACAGCGGCGC
CAGCAGATCG ACTTCACCGA TCGCCTGTAC CGCAACCAGA CGCGGCTGAT CGCGCGCACC
GGGTCCGGGC TGCTGCCGGA CGCGGCGAAG CTCGCCGGCA AGCGCGTCGC GGTCGAACAG
GGCACGGTCC AGGAAACCTA TGCGCGTGAG AAGTGGGCGC CCGCGAAGGT CGAGGTCGTG
CCGTATCCGA GCTACGACCA GGCGTATGCG GACCTCGTCA CCGGGCGCGT CGACGGCGTG
CTGATGGACG CCGTGCAAGG CCAGCTCGGG TTCCTCGCGA CGCCGCGCGG CAAGGGCTTC
TCGTTCGCGG GCGGCGTGGT GTACGACGCG AAGATCATGG GCAACGGCGA TGCGGCCGGC
GTGCGCAAGA CCGACACCGA CCTGCGCGAC GCGCTGAATC GCGCCATCGC GCAGATTCGC
GGCGACGGCA CCTACAACAC GATCCAGGCG AAATATTTCG ACTTCGACAT GTACGGGAAC
TGA
 
Protein sequence
MKTRLTILLS AAAMAFASLA SAKEWTTIRI GVDPTYPPFE STATDGSVKG FDIDLGNALC 
AKLKAKCVWV SSSFDGLIPG LQARKFDVIL SSMAATEQRR QQIDFTDRLY RNQTRLIART
GSGLLPDAAK LAGKRVAVEQ GTVQETYARE KWAPAKVEVV PYPSYDQAYA DLVTGRVDGV
LMDAVQGQLG FLATPRGKGF SFAGGVVYDA KIMGNGDAAG VRKTDTDLRD ALNRAIAQIR
GDGTYNTIQA KYFDFDMYGN