Gene Bcenmc03_6548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6548 
Symbol 
ID6125471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp601782 
End bp602906 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content73% 
IMG OID641647561 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001774158 
Protein GI170735044 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.490591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.300453 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGC GCCGCTTCGA CGTCGTCGTG GCCGGCGGCG GTCTCGTCGG CATGGCCATC 
GCGTGGGGCA TCGCGCGTCT CGGCCAGCGC GTCGCGGTGT GCGACGGCGA CGACATCGCG
TTTCGCGCGG CGCGCGGCAA TTTCGGGCTC GTGTGGGTGC AGGGCAAGGG CGGCCGCTGC
CTGCCGTATG CGCGCTGGTC GCGCGAATCG TCCGAGCGCT GGCATGCGTT CGCCGCGCAG
TTGCAGCGCG AAACGGGCGT GGACTGCGCG TTCGAGCGCC CGGGCGGCAT CGAGCTGTTC
GAGCAGCGCG CGGAACTCGA CAGCGCGACC GACCTGCTCG AATCGCTGCG CCGGCAGGAA
GCCGCGCTGT CGTACGAGGT GCTCGATCCG GCGGCGCTGC GCCGGCGCAT TCCCGCGGCA
TCGCCGTCGC TGGCCGGCGC GCTGTGGTCG CCGAACGACG GTCACGCGAA TCCGCTCACC
ACGCTGCGCG CGATGCTGCA GGCGTTTCAG CAGTGCGGCG GCATCTATCT GCCGCGCAGC
GAAGTCGCCG AAATCCGGCC GCGCGCCGGG CGCTTCGAGG TCGACACGCG CGATGCGCGG
CTCGAAGCCG GGCGCGTGGT GCTCGCGGCC GGCCTCGACA ACGCGCGGCT CGCGCCGATG
GTCGACCTGC GCGCACCGAT CTCGCCGCTG CGCGGCCAGA TCATGGTCAC CGAACGCCTC
GCGCCGTTTC TCGACTATCC GACACTCGTC GTCCGGCAGA CGCCGGAAGG CTCAGTGCTC
CTCGGCGATT CGGCCGAAGA CGTCGGCTTC GACGACGGCC AGACACGCCC GGCGATGGTC
GACATCGCGC GCCGCGCCCG CACCGCGTTC CCGGCGCTGG CCCATGCGCG CATCGTGCGC
GCATGGGGTG CGCTGCGCAT CATGACGCCC GACGGCCTGC CCGTCTACGA GGCGTCGGCC
ACGTACCCCG GCGCGTTCAT CGCGATCTGC CACAGCGGCG TCACGCTCGC GGCGACCCAC
GCCGATCTCG TCGCGCCGTG GATCGCCGGC GGCGCCGCGC CGGCCGACCT GTCCGCCTTT
ACCACCGCGC GCTTCGACGC GCCCACGGAA GCCCGGCATG TTTGA
 
Protein sequence
MTVRRFDVVV AGGGLVGMAI AWGIARLGQR VAVCDGDDIA FRAARGNFGL VWVQGKGGRC 
LPYARWSRES SERWHAFAAQ LQRETGVDCA FERPGGIELF EQRAELDSAT DLLESLRRQE
AALSYEVLDP AALRRRIPAA SPSLAGALWS PNDGHANPLT TLRAMLQAFQ QCGGIYLPRS
EVAEIRPRAG RFEVDTRDAR LEAGRVVLAA GLDNARLAPM VDLRAPISPL RGQIMVTERL
APFLDYPTLV VRQTPEGSVL LGDSAEDVGF DDGQTRPAMV DIARRARTAF PALAHARIVR
AWGALRIMTP DGLPVYEASA TYPGAFIAIC HSGVTLAATH ADLVAPWIAG GAAPADLSAF
TTARFDAPTE ARHV