Gene Bcenmc03_6540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6540 
Symbol 
ID6125463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp593819 
End bp594727 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content64% 
IMG OID641647553 
Productalpha/beta hydrolase fold 
Protein accessionYP_001774150 
Protein GI170735036 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.300513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.534481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAGA CAGAGATCGA AACACCGGGG CCGTCCGGCC CGCTGAGCGG CACGCTGTTG 
TCTCCGGCGG CGGACGACGT TCCGGTGGTG CTGATCGTGC CGGGGTCCGG CCCGACCGAC
CGCAACGGCA ACAATCCCCA TGGCATTCAG GCATCGACCT ATCGTTTGCT CGCCGAAGGC
TTGCTCGCTC AAGGCATCGC GTCGGTTCGC ATCGACAAGC GCGGCATGTA CGGTAGCGCG
TCGGCGATCG CGGATGCGGA CGACGTCACG ATCGACGACT ACGCCGCGGA CGTCTGCGCG
TGGGTAACGG CCATCCGGAC GCGGACCGGC GCGCGCCGCG TATGGGTCCT CGGGCATAGC
GAGGGAGGAT GGGTCGCGTT GTCGGCGGCA CGTCGAACCG CCGACATCCG CGGTTTGATC
CTGGTTTCCA CGGCAGGACG GCCGCTCGGA CAGGTACTGG CGCAGCAACT GCAGTCGAAC
CTCCCGAATG CCGCCGTTCT GCGCAACGCG ATGTCGATAC TCGCATCGCT CGAAGCCGGA
AAGACGGTCG ATGCGGCCGA TATCGATCCC GTACTGATGC CGTTGTTCAG GCCGCGGGTT
CAGCGGTTCC TGATGAGCGA ACTGGCGATC GATCCGGCGG CCCTTCTGAC CGGCTATACG
GAGCCGGTGC TGATCGTGCA GGGCGCGAGG GATATTCAGG TTGGCGTGCA GGACGCGCAG
CGGTTGAAGG ACGCGAATCC ACGCGCCCGG CTGACGATTG TCGCGAATGC CAATCACGTG
CTCAAAACCG TTCACACGGA TGCGCTGGAC GAAAACCTCG CCACGTATTC GAACCCGGAT
CTCCCTTTGG CAAAGGGTGT GGTGGAAGCC ATTTCGGCCG AGATACTCGC CGACCATCGG
GCAGCGTGA
 
Protein sequence
MMQTEIETPG PSGPLSGTLL SPAADDVPVV LIVPGSGPTD RNGNNPHGIQ ASTYRLLAEG 
LLAQGIASVR IDKRGMYGSA SAIADADDVT IDDYAADVCA WVTAIRTRTG ARRVWVLGHS
EGGWVALSAA RRTADIRGLI LVSTAGRPLG QVLAQQLQSN LPNAAVLRNA MSILASLEAG
KTVDAADIDP VLMPLFRPRV QRFLMSELAI DPAALLTGYT EPVLIVQGAR DIQVGVQDAQ
RLKDANPRAR LTIVANANHV LKTVHTDALD ENLATYSNPD LPLAKGVVEA ISAEILADHR
AA