| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6527 |
|---|
| Symbol | |
|---|
| ID | 6125450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 582737 |
|---|
| End bp | 583660 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641647540 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001774137 |
|---|
| Protein GI | 170735023 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.226284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCTG ACCAGAATGG TGAATTCGAA TCACAATCGA TTCGTACGAA CCTGCCGTCG
CTGATGGCGC TGCGTTGTTT CGACGCGGCG GCGCGTCACG AGAATTTCAG TCGCGCGGCC
GACGAGCTGT GCCTGACCCA TGGCGCGGTC AGCCGCGCGG TGCGTCTGCT CGAGGACGAT
CTGGGCGTGG CGCTGTTCGA GCGGCGCAGT CGTCGCGTGT TCCTGACCGA GGCAGGCCGC
ACGCTCGCCC GGGCCGTCCA TGATGGACTG GGCCTGATGC GTCACGCCGC CCACGCGTTG
CGCACCGAGG CCGCCCGTGC GCGGCGTTCG GTCCTGTCGT GCGAGCCGAC GCTGCTGATG
CGCTGGTTGA TCCCGCGCTG GCCGGATTTC CAGGCACGGC ATGCGGGCGT CGATATCCAT
CTGGCCGCCG CGGGCGGGCC GTTCTCGTTC GACAGCGGTA TCGACATGGC GATACGTCGC
AACGATTTCG CGTGGCCGGC CGGGTATCAC GCCGAGCATC TGTTCGCCGA GCGGGTGGGG
CCGGTTTGCC GGCCGGACAA GGTCAGTGCG TGGTTTGCAT CGCGGCGCGG CGGCCGCGCG
TTGAAGCCGG ACGCCGCGCT GCTGCATACG CGGACCCGGC CGGACGCATG GAACGCGTGG
GCGGCGGCGT CGAATCAGCC GGCCGCGAAC GGGCGCGGGC AGCGGTTCGA TCACTTCTAC
TTCAGTTTGC AGGCGGCCGT TGCGGGGTTG GGCGTCGCGA TCGGGCCGTG GCATCTGGTG
CGCGACGACA TCGAAAGCGG TGTGCTGGTC GCGCCAATGG GGTTCGTCGA GGATGGATCG
GATTACTACC TGTTGACGCC AGCGCCGGTG GCGGAAGGAG GTGCGCAGGC AGCGTTGCTG
GCGTGGTTGA AGGAGATGGT TTGA
|
|---|
| Protein sequence | MISDQNGEFE SQSIRTNLPS LMALRCFDAA ARHENFSRAA DELCLTHGAV SRAVRLLEDD
LGVALFERRS RRVFLTEAGR TLARAVHDGL GLMRHAAHAL RTEAARARRS VLSCEPTLLM
RWLIPRWPDF QARHAGVDIH LAAAGGPFSF DSGIDMAIRR NDFAWPAGYH AEHLFAERVG
PVCRPDKVSA WFASRRGGRA LKPDAALLHT RTRPDAWNAW AAASNQPAAN GRGQRFDHFY
FSLQAAVAGL GVAIGPWHLV RDDIESGVLV APMGFVEDGS DYYLLTPAPV AEGGAQAALL
AWLKEMV
|
|---|
| |