| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6524 |
|---|
| Symbol | |
|---|
| ID | 6125447 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 580764 |
|---|
| End bp | 581252 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641647537 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001774134 |
|---|
| Protein GI | 170735020 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.372376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGG ATGACAAACT GAAACAGGTC GCAGCCGAAT TCGGATTCGA TCCGGACGAA
ACGATCAGGA TCGGCGGAAA GTACACGCCC GTTCTGGTCG ACGGAAGCAC GGCCTACATA
GCCGGCCAGG TGCCGCGAAT CGGTGAAGTC GTGCATTTCG TCGGCATCGT GGGCGAATCC
GTTTCGCTGG ACGATGGCCG CCGGGCAGCC GGTATCTCGG CGCTGCGCGC GCTGTCGCTG
ATCCGCAAGC ATTGCGGCAC GCTCGATGCG ATCGCGACGG TACCGCGCAT GACCGTGTAC
GTGCGAAGCG CGCCCGGCTT CACGATGCAG AGCGAAGTGG CCGACGGCGC GTCGGACGTG
TTGGTCGCGG TGCTCGGCGA CGCCGGCGTC CATACGCGTT CGTCGGTCGG CGTGCTGCAA
TTGCCGAAGG GTGCGTCGGT CGAAGCCGAT TTCATTTTCG GCTTGAAGCG CAGCGGCACG
CCCGGCTGA
|
|---|
| Protein sequence | MNRDDKLKQV AAEFGFDPDE TIRIGGKYTP VLVDGSTAYI AGQVPRIGEV VHFVGIVGES
VSLDDGRRAA GISALRALSL IRKHCGTLDA IATVPRMTVY VRSAPGFTMQ SEVADGASDV
LVAVLGDAGV HTRSSVGVLQ LPKGASVEAD FIFGLKRSGT PG
|
|---|
| |