| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6516 |
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| Symbol | |
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| ID | 6125439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 572823 |
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| End bp | 574175 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641647529 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_001774126 |
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| Protein GI | 170735012 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0329975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCG CGATCCTGTC CGTCAGTTTT CTGATATTTC TCGTGCTCGG CGTGCCCGTG
TCGTTCGCGC TCGGCATTGC GTGCGTGCTG ACCTACATGG TCGAAGGCCT GCCGATCGCG
ACCGCGATGC AGGCGATGAT CTCGGGGATG AACGCGTTCT CGTTCCTCGC GGTGCCGTTC
TTCATCTTCT CCGGCGAACT GATGCTGCAT GGCGGCATCG CCGACCGCAT CCTGCGCTTC
GCGCAGGCGA CCGTCGGCCA CTTCCGCGGC GGCCTCGGGA TGGCGAACGT CGTCGCGTGC
ACGCTGTTCG GCGGCGTGTC GGGCTCGCCG ACCGCCGATA CGTCGGCGAT GGGCGGCGTG
GTGATTCCGC TGATGAAGCG CGAAGGCTAC AGCGCCGCGT ACGCGGTCAA CGTGACGACG
CATGCGTCGC TCGCCGGCGC GCTGATGCCG ACGTCGACCA ACATGATCAT CTACGCGTTC
GCCGCGCAGG GCATCACCGG GATGCTGCAC GGCCAGCCGG TGAGCGGCGT GTCGATCGGC
GACCTGCTGT TCTCGGGGCT CCTGCCGGTG TTGTGGGTGA TGGGTTTCGT GCTCGCCGCC
GCGTACTGGC AGGCCGTGCG TCACGGCTAT CCGCGCCGCG AGGACGGCTC GTCCGCACTG
CCGCGGTTTC CCGGCTGGTA TGCGGTGCTG CGCAGCTTCG TCGGCGCGGT GCCGGGGCTG
ATGGTGATCG CGATCATCCT GGTGTGCGTC GCGAAGGGCA TCGCCACCGC GACCGAAGCG
GCCGCGATCG CCGTCGTGTA CTCGCTGGTG CTGACCGCGG TGGTCTACCG GACGCTGACG
GCCGAGAAGC TGCGCCGCGC GCTGTCGCAT GCGGCACGCA CGACGGGCGT CGTGCTGCTG
CTGATCGCGG TGTCCAACAT GCTGCGCTTC CAGATGTCGT ACCTGGAGAT TCCGGATGCG
ATCGAAGGGC TGCTGAAGCA GTCGACCGCG GCGCCGTGGC TGATGCTGCT GTACATCAAC
ATCATCCAGG TGTTCCTCGG CACGTTCGTC GACATGGCCG CGCACATCCT GATCACGACG
CCGCTGTTCC TGCCGATCGC GATGGCGTGC GGCGTCGGGC CGGTGCAGTT CGGGATCATG
CTGCTGCTGA ACTGCTCGCT CGGCCTCGTG CACCCGCCGA TCGGGTCGGT GCAGTTCGTC
GGCTGCGCGA TCGGCAACGT GTCGATCGGC GAGACGACGA AGATGGCGTG GCCGTACTAC
CTCGCGATCT TCAGCGCGAT CAATATCGTC ACGTACATGC CGTTCTTCTC GACGTGGCTA
CCGAGCCTGA TCAGCGGGCA CGCGGTGTTC TGA
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| Protein sequence | MELAILSVSF LIFLVLGVPV SFALGIACVL TYMVEGLPIA TAMQAMISGM NAFSFLAVPF
FIFSGELMLH GGIADRILRF AQATVGHFRG GLGMANVVAC TLFGGVSGSP TADTSAMGGV
VIPLMKREGY SAAYAVNVTT HASLAGALMP TSTNMIIYAF AAQGITGMLH GQPVSGVSIG
DLLFSGLLPV LWVMGFVLAA AYWQAVRHGY PRREDGSSAL PRFPGWYAVL RSFVGAVPGL
MVIAIILVCV AKGIATATEA AAIAVVYSLV LTAVVYRTLT AEKLRRALSH AARTTGVVLL
LIAVSNMLRF QMSYLEIPDA IEGLLKQSTA APWLMLLYIN IIQVFLGTFV DMAAHILITT
PLFLPIAMAC GVGPVQFGIM LLLNCSLGLV HPPIGSVQFV GCAIGNVSIG ETTKMAWPYY
LAIFSAINIV TYMPFFSTWL PSLISGHAVF
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