| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6495 |
|---|
| Symbol | |
|---|
| ID | 6125418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 551472 |
|---|
| End bp | 552689 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641647508 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001774105 |
|---|
| Protein GI | 170734991 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.96926 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACTGGT CGACGTTTGC GTGGCGTAAC CTCTGGCGCA ACCGGCGCCG CACCGTGCTG
ACGATGGCGA TGATCGGCGT CGCCGCGTTC GCGTCGAGCC TCGCGCTCGG CTACGTGATC
GCGACCTTCG ACGCGGTGCG TGAAGGGTCG ATCGACAGCG GCGTCGGCCA TGTGCAGGTG
CTGCACCACG GCTATCTCGA CCTGATCGGC GAACGGCCGC TGCAATACGG GCTGACCGCG
GACGAGCAGA CCGCCGCCAC GCAGGCCATT GCAAAACTCC CCGGCGTCGC GACGACCGCG
CGCGGCATCG ACTTCGACGG GCTCGTGTCG AACGGCGATC TCAGCTACGG CTTCGTCGGC
GAAGGGATCG AGCCGAATCG CGAGCCACCC GGCTTCTTCG ACTATCACAC GGTGCTGTCG
GGCCGCTATC TGTCGCCGAC GAACGCGGGC ACCGAAGTCG TCGTCGGCGC CGAACTCGCG
CGCAAGCTCG GCGTGCACGT CGGCTCGGTC GTGCAGCTGA TGGCGTCGAC CGCGCACGGC
GGCATCAACG CGACCGACGC GCAGATCGTC GGCGTGATGA GCACCGGCAA CAAGGACGTC
GACGAACGGA TCGTCAACGT GACGTTCACG GCCGCGCAGG CGCTGCTGCG CACCGACCGC
GCGTCGCGTA TCGCGGTGTT CCTCGAGGAC ACCGCCGGCA CGCCGGCCGC CGCCGCGACG
CTGCGCGCCG CGCTGCCGAC GCTCGACGTG CGGACCTGGG ACCAGCTCGT GTCGCTCTAT
CACCAGGTCG TCGCGCTGTA CAAGAACCAG TTCTCGGTGT TCGGCGCGAT TCTCTGCGTG
ACGATCCTGC TGTCGATGAG CAACTGGATC TTGATGAGCA TCGTCGAGCG CCGCCGCGAG
ATCTCGACGC TGCGCGCGCT CGGCGTGCCG GCCGCCACGG TGCGCGGCGT GCTGATCCAG
GAAACCGCGC TGCTCGGCCT GCTCGGTGCG GCCGCCGGCA TCGCGCTCGC GCTGCTGACG
ATGGTCGCGC TCAATCACGC GCAGATCCAC CTGCCCGCGC CACCCGGCCG CGTGAAGCCG
ATCCTGCTCG AATTCACCGT GTCGCCCGTC GCCGTGGCCG CCGTCGAAGC CGCGTTCGTC
GTGCTCGGCG TGGCCGCGGC GCTGCTCGCG ACGCTCGGGC TCGCGAAACG CAACATCCTC
GAAGGACTCG CCCCATGA
|
|---|
| Protein sequence | MNWSTFAWRN LWRNRRRTVL TMAMIGVAAF ASSLALGYVI ATFDAVREGS IDSGVGHVQV
LHHGYLDLIG ERPLQYGLTA DEQTAATQAI AKLPGVATTA RGIDFDGLVS NGDLSYGFVG
EGIEPNREPP GFFDYHTVLS GRYLSPTNAG TEVVVGAELA RKLGVHVGSV VQLMASTAHG
GINATDAQIV GVMSTGNKDV DERIVNVTFT AAQALLRTDR ASRIAVFLED TAGTPAAAAT
LRAALPTLDV RTWDQLVSLY HQVVALYKNQ FSVFGAILCV TILLSMSNWI LMSIVERRRE
ISTLRALGVP AATVRGVLIQ ETALLGLLGA AAGIALALLT MVALNHAQIH LPAPPGRVKP
ILLEFTVSPV AVAAVEAAFV VLGVAAALLA TLGLAKRNIL EGLAP
|
|---|
| |