| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6488 |
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| Symbol | |
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| ID | 6125411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 542696 |
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| End bp | 544165 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641647501 |
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| Product | general substrate transporter |
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| Protein accession | YP_001774098 |
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| Protein GI | 170734984 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.932771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCCCAT CGCAAGCGCG CCCCGCGAAA ACCCGGTCTT CGCGCCAGTC CATCAAGCTG
GATGACATCA CGATCGTCGA CCCGGCCGTC CTCAAGCGCG CGGTCGGCGC AATGGCGTTC
GGCAACGCGA TGGAATGGTT CGACTTCGGC GTCTACAGCT ATATCGCCGT CACACTCGGC
AAGGTGTTCT TCCCGTCCAG CAGCCCGTCC GCGCAGCTGC TGGCCACCTT CGGCACGTTC
GCGGCCGCGT TCCTCGTGCG CCCGCTCGGC GGCATGGTGT TCGGCCCGCT CGGCGATCGC
ATCGGCCGCC AGCGCGTGCT CGCCGCCACG ATGATCATGA TGGCCGTCGG CACCTTCGCG
ATCGGCCTGA TCCCGAGCTA TGCGTCGATC AGCATCATGG CCCCGATCCT GCTGCTCGTC
GCCCGCCTCG TGCAGGGCTT CTCGACCGGC GGCGAGTACG GCGGCGCCGC CACCTTCATC
GCCGAGTTCG CGACCGACAG GCGCCGCGGC TTCATGGGCA GCTTCCTCGA GTTCGGCACG
CTGATCGGCT ATACGCTCGG CGCGGCCACG GTCGCGCTGC TGACGGCCAC GCTGTCGCAG
GAAACGCTGC TGTCGTGGGG CTGGCGCGTG CCGTTCTTCA TCGCCGGGCC GCTCGGCCTC
GTCGGCCTCT ACGTGCGGCT CAAGCTGGAG GAAACGCCAG CCTTCAAAAA GGAAGCCGAA
GCGCGCGAAG CGGACGAACG CGCGCGGCCG AAGCAGCGCT TCGCGACGCT GCTCGTCGAA
CAGTGGAAGC CGCTGCTGCA ATGCGTCGGC CTCGTGCTGA TCTTCAACGT GACCGACTAC
ATGGCGCTGT CGTACCTGCC GAGCTACCTG TCGGCGACGC TGCACGTGCG CGAATCGCAC
GGGCTCTTCA TGGTGCTGCT CGTGATGGTG CTGATGATGC CGATGACGCT GTACGCCGGG
CACCTGTCGG ACAAGGTCGG CCGCAAGCCG GTTATGATGG CCGGCTGCGT GGGCCTGCTC
GCGCTGTCGG TGCCGGCGCT GATGCTGATC CGCACCGGCG GCACGCTGCC GATCTTCGGC
GGGATGCTGA TTTACGGTGT CCTGCTGTCG ACGTTCACGG GCGTGATGCC GTCGGCGCTG
CCCGCGCTGT TCCCGACGCG GATTCGCTAC GGTGCGCTCG CGATCGGCTT CAACGTGTCG
GTGTCGCTGT TCGGCGGCAC GACGCCGCTC GTCACCGCGT GGCTGGTCGA TCGCACCGGC
GACCTGATGA TGCCCGCCTA CTACCTGATG GGTGCGTCGT TCATCGGCAT CGTGTCGGTG
CTCGCGCTGC GCGAGACCGC GCGTCAGCCG CTGCCCGGCT CCGGGCCGTG TGTGGCGAGC
CGCGCGGAAG CATTGAACCT CGTACGCGGC GGCGCCGACG AAGCGCGTGT GCGCGACCGG
AAGTTCACGC CGGTCAGCGA GCGTGCGTGA
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| Protein sequence | MSPSQARPAK TRSSRQSIKL DDITIVDPAV LKRAVGAMAF GNAMEWFDFG VYSYIAVTLG
KVFFPSSSPS AQLLATFGTF AAAFLVRPLG GMVFGPLGDR IGRQRVLAAT MIMMAVGTFA
IGLIPSYASI SIMAPILLLV ARLVQGFSTG GEYGGAATFI AEFATDRRRG FMGSFLEFGT
LIGYTLGAAT VALLTATLSQ ETLLSWGWRV PFFIAGPLGL VGLYVRLKLE ETPAFKKEAE
AREADERARP KQRFATLLVE QWKPLLQCVG LVLIFNVTDY MALSYLPSYL SATLHVRESH
GLFMVLLVMV LMMPMTLYAG HLSDKVGRKP VMMAGCVGLL ALSVPALMLI RTGGTLPIFG
GMLIYGVLLS TFTGVMPSAL PALFPTRIRY GALAIGFNVS VSLFGGTTPL VTAWLVDRTG
DLMMPAYYLM GASFIGIVSV LALRETARQP LPGSGPCVAS RAEALNLVRG GADEARVRDR
KFTPVSERA
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