| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6478 |
|---|
| Symbol | |
|---|
| ID | 6125401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 530988 |
|---|
| End bp | 533330 |
|---|
| Gene Length | 2343 bp |
|---|
| Protein Length | 780 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641647491 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001774088 |
|---|
| Protein GI | 170734974 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.360595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0849946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAGGC ACGACGCGGC ATGGACGGCG GGATGTCGCG TGTTGCTCCT GCTGCTGGCG
GCGCTGGCCG TCACGTGCGC GACGGCCCGT GCCGCAACGG CGCCGAGTCC CGCGCAACTC
GAAGCGGTAT CGGTTTTCGA GGATGCCGGC ACGACGCTAA CGGCCAACGA GGTCGCCGCG
CGACTCGCCG ATCCGTCGCG TCACGCAGCC CCCCCGGCCC GCACCGCGTT CAACGTGACG
TTCTCGCGCT CGGCGTGGTG GGTCCGCGCG ACGCTGATCA ACCGGGACAG CCAGACGCAC
CCGCTGGTGC TCGCGATTCG CGATGCACGC GTCGATCGGG CCGACTTCTA TGTCGGCCGG
CACGGCCAGT GGACGCTCGA TCGCAGCTTC CCGACCGATC GCGGCGACGC GCACGACGCG
CCGGCGCGCT ACCCGACCCT CGACGTCACG CTGCGCGCGG GCGAACAGTT GCCCGTGCTG
ATCCGCATCA CGTCGCGCAA GGAGATGCGC CTTGCGCCGG TCGCGTTCAC CCGAGACGCA
TGGATCGCGC AGGAATTGCA CGCGTCGATG TGGAACTTCG GGTTCTTCGG CGGGCTGCTC
GCCCTCGTCT GGTGCGCGCT GCTGATCGGC TTTTTCTCGC GCAGCGGCGT GTTCCACGTG
CTGGCCGCGC TGACCCTGAA CACCGCGCTG TTCGAAGCGG CGTACCGCGG CTATCTCGCG
ACGCTCCTGT CGCCCGGCGC GCGCGAATGG TCGACGCGCG GCGAGACGAT CTTCGTGTAC
CTGTCGGTCG CGTGCTTCAT CGTCTTCATC CTGATGGTCG CGCACCGCGA GAAGGCCAGG
ATGCCGATGC GCGCGGTGTA CGTGGCGTTT CTCGCGCTCG AATGCGTGGG CATCGCCGGC
GCGGCGTTCG GCGATCTGGC GAGCTTCGCC CGGTTCTGCC TGTGGCTGAA CACCGTGCTC
GGGCTCGTCA ACATCAGCCT GGCGCTGCTG CTCGTGATCC GGCGCACGCC GACCGCCCGC
GTGATGCTGA TCGCGGTCGC GTTCGCGACG TTCAACATGC TGATCCGCAT GCTCGACGGC
CGCGATGCGC TACCTCCCGT GCTGTCGTGG ATCCGGTCCG ACGTCTTTCC GAACCCGGTC
ATCGCGATCA TCGGGCTCGC GACGCACCTG CTGGTGCTGG CCGCGTGGAT TCACCACGTG
GGCCGGCAGC GCACCGAGGC ACGCAAGCGG CTCGAACACT GGCAGCTCAC CGAACAGGAC
CGGCTGCGCG ATGAGGTCGC GCGGCGCACG GTGGCGCTCA ACGACGCGTT GCAGCAGTCG
AAAACGCACA TGCAGCAGAA GATCGAGACG CTCGGCTATG TCAGCCACGA TCTGCGCGCG
CCGCTGTCGA CGATCAACGG CTATGCGAAG CTGCTGCTGG AAGGCGCGAC GCGCGGCCAG
GCGCGGCTGA TCCGGTCGAT CGACCGCAGC ATCCGCTATC AGCTCGCGCT GATCGACGAA
TTGCTCGCGT TCACGAAGGC CGAACTCCAG CCGCTCGGCG TCGCGCCCGA CCGTACCGAC
CTGCCCGGGC TGCTGGACGA CATCGGCCAT TACGCGGTCG CGCTGTGCGC GCAGCAGGAC
AACCGGTTCG TCTACCGGCC GGTCACGGCG CTGCCGCGCA CGGTGCTGAT CGACGGCATC
CGGCTGCAAC AGGTATTGCT GAACCTGCTG TCCAATGCAT CGAAATTCAC GCGCAACGGC
ACGGTCACGC TGTCGATTCA CGCGTCGCGC GAAGGCGATG CATGGCGCCT GCTGTTCGAG
GTCGCCGATA CGGGCATCGG CATCGACATC ACCGCGACCA CCGACATCTT CCGCGCGTAC
CAGCAGGTGC AGGCGGTGAA CGGCGGCACC GGGCTCGGCC TGTTCATCGC GCAGCGCATC
GTCACCGCGA TGGGCGGCGA GCTGGCCGTC GCGAGCCAGC CGGGCGTCGG CACGTCGTTC
TCGTTCGCGG TCGTCGCACC GGCGCTCGGC CATGCGCTCG CACCGGCGTC GGGGCTCGTC
CGGCAGTTTC ATCCCGCCGA CGAAGCGGAG CCGGCACACG CGGCGCCGGC GATGCACAGC
CCGCCCGCCG ACGCGCTCGC CGAGCTGATC GCGCTCGCCG GCGAAGGCCG GCTGACCGAT
ATCGAAGAAT GGCTCGGCCA GTACGTGGAC GAGCCGGGCC ATGCGCCGTT CGTGCAGGAA
ATGCGCGAGC ACCTCGATGC GCTGGACCTG CACGCGATCG AAAAACTGGC CGGCGCGCTG
AAACGCACGC GCGTCGCGGA TACGCCCTTC GACACCGAGG CGGATGCGAC CGGGCCGGCC
TGA
|
|---|
| Protein sequence | MRRHDAAWTA GCRVLLLLLA ALAVTCATAR AATAPSPAQL EAVSVFEDAG TTLTANEVAA
RLADPSRHAA PPARTAFNVT FSRSAWWVRA TLINRDSQTH PLVLAIRDAR VDRADFYVGR
HGQWTLDRSF PTDRGDAHDA PARYPTLDVT LRAGEQLPVL IRITSRKEMR LAPVAFTRDA
WIAQELHASM WNFGFFGGLL ALVWCALLIG FFSRSGVFHV LAALTLNTAL FEAAYRGYLA
TLLSPGAREW STRGETIFVY LSVACFIVFI LMVAHREKAR MPMRAVYVAF LALECVGIAG
AAFGDLASFA RFCLWLNTVL GLVNISLALL LVIRRTPTAR VMLIAVAFAT FNMLIRMLDG
RDALPPVLSW IRSDVFPNPV IAIIGLATHL LVLAAWIHHV GRQRTEARKR LEHWQLTEQD
RLRDEVARRT VALNDALQQS KTHMQQKIET LGYVSHDLRA PLSTINGYAK LLLEGATRGQ
ARLIRSIDRS IRYQLALIDE LLAFTKAELQ PLGVAPDRTD LPGLLDDIGH YAVALCAQQD
NRFVYRPVTA LPRTVLIDGI RLQQVLLNLL SNASKFTRNG TVTLSIHASR EGDAWRLLFE
VADTGIGIDI TATTDIFRAY QQVQAVNGGT GLGLFIAQRI VTAMGGELAV ASQPGVGTSF
SFAVVAPALG HALAPASGLV RQFHPADEAE PAHAAPAMHS PPADALAELI ALAGEGRLTD
IEEWLGQYVD EPGHAPFVQE MREHLDALDL HAIEKLAGAL KRTRVADTPF DTEADATGPA
|
|---|
| |