| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6476 |
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| Symbol | |
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| ID | 6125399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | - |
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| Start bp | 524056 |
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| End bp | 528696 |
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| Gene Length | 4641 bp |
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| Protein Length | 1546 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641647489 |
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| Product | YadA domain-containing protein |
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| Protein accession | YP_001774086 |
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| Protein GI | 170734972 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5099] RNA-binding protein of the Puf family, translational repressor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.240563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGT CGTTCAAGTC GATCTGGAAC GAAGCATTGG GGGCCTGGGT TGCGGCTTCG
GAGCTTGACC GGGCACGCGG CAAGCGTGTT GCGTCGTCGA GGCGCGCGCC GGAATGCGCC
GCGCACGGAG AAGCCGCGAC GCACGCGGGC ATGCCGTCGG CGCCTTCGGT GCTGAGGCTG
GCCGTGCTGA CGGCGACCGC TTGCCTCGGG TTGTTCCATG CGAGTGCGCA TGCGCAATAC
GCGCAGGATG GCGGTACCGC GTCGGGCGGC ACGACGGCGA TCTCGATCGG CCTCGGTTCG
ACTGCCGCGC AGCAGAATTC CACCGCAGTG GGCAACCTGT CGACGGCGCA GGGTTTGTCG
GCCACGGCGC TCGGCCCGGG CGCACATGCG ATGGGCGATG GTTCGACGTC CGTCGGCATC
AACTCGCAGG CGACCGGCGT CAACAGTTCG GCGCTCGGTG TGCAGGCGAT CGGTTCCGGC
GACTATTCGG TCGCGATCGG CAACCTGTCG AGCGCGACCC AAAGCGGCGC GGTGGCGATG
GGCAGCGGCG CGGCGGCGAC CGGCGTTTCC GCGGTGGGGC TGGGCAACAA CGCGCTGGCG
TCCGGTCAAT ACGCGGCGGC GGTGGGGCTC GGCGCCAGTG CGGCGGGCGC GCAGAGCGTC
TCGCTCGGCT ATGCGTCGCA TGCCACCAAC ACGGGTTCCG TCGCGCTCGG CAACCAGTCG
ACCAGTTCGG GCGCGGCCGG CGTGGCCGTC GGCAGCGGTG CGCTGACGAC CGGGAATTCC
GGCGTGGCGA TGGGCGTGAA CAGCGGGGCG AAGGGTACCG CGTCGATCGC GATCGGCTGG
GGCGGCACCG CGGGCGTACC CGGGTCGGGC ACGCAGTCGC TCGGCACGAG TTCGATCGCG
ATGGGCTCGA ATACGAATGC CGGCGCCGAT CAGGCGCTGG CATTCGGCCT GAACGCCAAT
GCGTCGGGCG TCAGTTCGAT CGCGATGGGT GTGCAGTCGA CCGCGACCCA GCAGTTCGCG
ACCGCGCTCG GCAATCTGTC GCTGGCGACC GGCGTGTCCT CCAGCGCGCT GGGGCCCGGG
GCGACGGCAT CGGCCACGAA CGCGACGGCG GTCGGTATCA ACAGCGTAGC GGCGGCGGCG
TCGACCGTGG CGATCGGCGA TTCCAACTCG GTTGCCGCGG CGGCGGGTGC GGGCTCGATC
GCTGGCGGCA ACAACTCGAA GGTGCTGGGC GGCATCGGCG CCGTCGCGCT CGGCCTGGGC
CAGACGGTGA GCGGCAACGG CGCGGTCGCG ATCGGCGATC CGAGCACCGC GATCGGCACC
GGCGCGGTCA CGATGGGGTC GAACAACACC GCGAACGGCG ACGGCGCGGT CGCGATCGGC
AACACCAACA ACGCGCAGGG CACGGGTTCC CTGGCGCTCG GCAATACATC GACGGCAGCG
GCGGCGGGCG CCGTCGCGTT CGGCGCGTCG GCCGTGGCCA ACAACGCAAA CGATGTCGCG
CTCGGCTCGG GATCGACGAC GGCCGCGCCG AATCCGACGG CCAGCGCGGT CATCGGCGGC
GTCACGTACA ACTTCAACGG CATCAATCCG GCGAGCGTCG TCAGCGTGGG GAATGTCGGC
GCCGAGCGCC AGATCACCAA CGTCGCGGCC GGGCGGATCA GTTCGTCGAG TACGGACGCA
ATCAACGGCT CGCAACTCGC CGCGACGAAC ACGGCAGTCG ATTCATTGTC GACGTCGACG
GCGTCGAGCA TCACGTCGTT GTCGACCGGG GTTTCATCGC TGTCGACCGG TCTGAGTTCG
ACCAATAGCG CGGTGACGTC GCTATCGACT TCGACGTCGA CCGGGATCAG TTCGCTGTCG
ACGGGGCTGA GCTCGACCAA TAGCGCGGTG ACATCGCTAT CGACTTCGAC GTCGACCGGC
ATCAGCTCGT TGTCGACCGG CCTGAGTTCG ACCGACAGCA TCGTGACGTC GCTGTCGACG
TCGACATCGA CGGGGTTGTC ATCGGCCAAT AGTTCGATCG CGTCGTTGTC CACCTCGACC
TCGACGGGCA TCGGTTCGTT GTCCACCGGG CTGAGTTCGA CCGACAGCAC GGTGACGTCG
CTGTCGACGT CCACATCGAC GGGCCTGTCG TCGGCCAATA GTTCGATCAC GTCGCTGTCG
ACCTCGACGT CGACGGGTAT CGGTTCGCTG TCCACCGGCC TGAGCTCGAC CAACAGTGCG
GTGACGTCGC TGTCCACGTC CACGTCGACC GGCATCGGCT CGCTGTCCAC CGGCCTCAGT
TCGACCAATA GCTCGGTGAC GTCGCTGTCC ACGTCGACGT CGACGGTCGT CGGCTCGTTG
TCCACGGGCT TGAGTTCGAC CAACAGCTCG GTGACGTCGT TGTCCACGTC GACCTCGACG
GTCGTCGGCT CGCTGTCCAC CGGCCTGAGC TCGACCAACA GCTCGGTGAC GTCGTTGTCC
ACGTCGACCT CGACGGGCAT CAGCTCGCTG TCGACCGGCC TGAGTTCGAC CAACAGCTCG
GTGACGTCGT TGTCCACGTC GACGTCGACG GGCATCAGCT CGCTGTCGAC CGGCCTGAGT
TCGACCAACA GCTCGGTGAC GTCGCTGTCC ACGTCGACGT CGACGGTCGT CGGCTCGTTG
TCCACCGGCC TGAGTTCGAC GAACAGCAAC CTGACCTCGC TGTCCACGTC GACTTCGACG
GTCGTCGGTT CGCTGTCCAC TGGCTTGAGT TCGACCAACA GCTCGATCAC GTCGCTGTCC
ACGTCGACGT CGACGATCGT CGGTTCGTTG TCCACCGGCC TGAGTTCGAC GAACAGCAGC
CTGACGTCGC TGTCGACCGC CACGTCGACC GGGATCGGTT CGCTGTCGAC GGGCCTGAGC
TCGATCGCGA ACAACAACAC GAACCTCGGC AACAGCACGG CCGGCGCGAT CGGCGGCGGC
GCCACCTACG ATCCGACCAC CGGCACGATC TCGGCGCCGT CGTACGTGAC ATACAACAGC
GACGGCTCGA CGACGATCAA CAACAACGTC GGCTCCGCGA TCGACAACAT CAACGCGAAC
GGCATCAAGT ACTTCCACGC GAACTCGACC GCGCCGGACA GCCAGGCGCT CGGCCTGGAC
AGCGTCGCGA TCGGCCCGAA CGCGATCTCG CGTGTGGACG GCAGCATCGC GCTCGGCTCC
GGTTCGGTGG CCGATCGCGC CGTGGTGCCG TCGTCGGGCA TCCTCCGCAA CGGTACCGCG
TCGATCCCGT TCAACACGAC GGATCAGACG CTGCTCGGCG CGGTCTCGGT AGGTGATGCG
ACGAACAAGA CGTACCGCCA GATCACCAAC GTCGCGGACG GCACCGGCCA GCAGGATGCG
GTGACGGTGC GCCAGCTGAC CGGCGCGCTG CAGTCGTTCG CGGTCACCGG CCAGAAGTAC
TTCCACGCGA ATTCGACGGC GGCCGATTCG CTCGCGGTCG GCGCGGAATC GGTCGCCGTC
GGGCCGACGA CGGTCGTCAA CGGCGACAAC GGCGTGGGCA TCGGCAACGG CGCGATCGTC
GACCAGACCG CGCCGGGGGG GATCGCGATC GGTCAGGCGG CGAGTTCCGC GCAAGTCGAC
GCGATCGCGC TGGGCAGCGG CGCGACGGCG ACCGGCGCGC AGTCGGTCGC GCAAGGCGCC
AACGCGGTGG CGGTCAGCGT GGGCAGCGTC GCGCTCGGCT CGGGCGCGCG CAGCACGGCG
ACCGATGCGC TCGCGCTCGG CGCCGGTGCG TCGGCGACGT TCGCGAACAG CGTCGCGCTG
GGAGCAGGCT CGCTGACCAC GGTCGGTGCG CTGACGAACT ACGTCGCGTA CGGGTTGAGC
AGCCCGCAGT CGTCGGCTGG AGAAATCAAC ATCGGCAATC GCCAGATCAC CGGCCTTGCG
GCCGGCAAGA ACGGCACCGA CGCGGTGAAC GTGTCGCAGC TCGATTCGGT CGCGAACCAG
TTGACGACGT TGATCGACCA GCGCACGGCC AACCTCGGCG GGCAGTACAC GACGAACCCG
AACGGCTCGA ACGTGCCGCC GGGCGCGAGC GGGTCGAATT CGTCGGCGGG CGGTTCGGGG
GCGGTCGCAT CGGGCGCGAA CAGCACGGCG GTCGGCAACA ATGCGCTCGC ATCGGGCAAC
GGCTCTTCCG CGATCGGCGT GGGCGCGACG GCAGCGGGCA ACAACTCGAC CGCGATCGGC
ACGGGCAGCA ACGACGGCGG GCGCTCGAAC GTGGTCGCGG TCGGCTCGGC GGATTCGGCG
CGCCAGGTCG TGAACGTCGC GGCCGGCACG CAGGGTACCG ACGCCGTGAA CGTGAACCAG
TTGAACGCGG TCTCGAACCA GTTCACGCAG TCGCTGAACA CGGTCAACAA CCAGCTCACG
CAGATGCAGC AGCAGATCCA GCAGACCGAT TCGATGGCCC GCGAGGGGAT CGCCGCGACC
GCCGCGATGG CGTCGATTCC GCACATGGAC CGCGATTCGA ACTTCGCGAT GGGGGTCGGC
ACGGCGACGT TCCAGGGCCA GAAGGCCATG GCGGTCGGCG TGCAGGCGCG CGTCACGGAG
AACCTGAAGG CGACGCTGAA CGGCGGTTTC GCCGGCAGCC AGCGCGTCGT CGGCGCGGGC
ATGCTGTATC AGTGGAAGTG A
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| Protein sequence | MNKSFKSIWN EALGAWVAAS ELDRARGKRV ASSRRAPECA AHGEAATHAG MPSAPSVLRL
AVLTATACLG LFHASAHAQY AQDGGTASGG TTAISIGLGS TAAQQNSTAV GNLSTAQGLS
ATALGPGAHA MGDGSTSVGI NSQATGVNSS ALGVQAIGSG DYSVAIGNLS SATQSGAVAM
GSGAAATGVS AVGLGNNALA SGQYAAAVGL GASAAGAQSV SLGYASHATN TGSVALGNQS
TSSGAAGVAV GSGALTTGNS GVAMGVNSGA KGTASIAIGW GGTAGVPGSG TQSLGTSSIA
MGSNTNAGAD QALAFGLNAN ASGVSSIAMG VQSTATQQFA TALGNLSLAT GVSSSALGPG
ATASATNATA VGINSVAAAA STVAIGDSNS VAAAAGAGSI AGGNNSKVLG GIGAVALGLG
QTVSGNGAVA IGDPSTAIGT GAVTMGSNNT ANGDGAVAIG NTNNAQGTGS LALGNTSTAA
AAGAVAFGAS AVANNANDVA LGSGSTTAAP NPTASAVIGG VTYNFNGINP ASVVSVGNVG
AERQITNVAA GRISSSSTDA INGSQLAATN TAVDSLSTST ASSITSLSTG VSSLSTGLSS
TNSAVTSLST STSTGISSLS TGLSSTNSAV TSLSTSTSTG ISSLSTGLSS TDSIVTSLST
STSTGLSSAN SSIASLSTST STGIGSLSTG LSSTDSTVTS LSTSTSTGLS SANSSITSLS
TSTSTGIGSL STGLSSTNSA VTSLSTSTST GIGSLSTGLS STNSSVTSLS TSTSTVVGSL
STGLSSTNSS VTSLSTSTST VVGSLSTGLS STNSSVTSLS TSTSTGISSL STGLSSTNSS
VTSLSTSTST GISSLSTGLS STNSSVTSLS TSTSTVVGSL STGLSSTNSN LTSLSTSTST
VVGSLSTGLS STNSSITSLS TSTSTIVGSL STGLSSTNSS LTSLSTATST GIGSLSTGLS
SIANNNTNLG NSTAGAIGGG ATYDPTTGTI SAPSYVTYNS DGSTTINNNV GSAIDNINAN
GIKYFHANST APDSQALGLD SVAIGPNAIS RVDGSIALGS GSVADRAVVP SSGILRNGTA
SIPFNTTDQT LLGAVSVGDA TNKTYRQITN VADGTGQQDA VTVRQLTGAL QSFAVTGQKY
FHANSTAADS LAVGAESVAV GPTTVVNGDN GVGIGNGAIV DQTAPGGIAI GQAASSAQVD
AIALGSGATA TGAQSVAQGA NAVAVSVGSV ALGSGARSTA TDALALGAGA SATFANSVAL
GAGSLTTVGA LTNYVAYGLS SPQSSAGEIN IGNRQITGLA AGKNGTDAVN VSQLDSVANQ
LTTLIDQRTA NLGGQYTTNP NGSNVPPGAS GSNSSAGGSG AVASGANSTA VGNNALASGN
GSSAIGVGAT AAGNNSTAIG TGSNDGGRSN VVAVGSADSA RQVVNVAAGT QGTDAVNVNQ
LNAVSNQFTQ SLNTVNNQLT QMQQQIQQTD SMAREGIAAT AAMASIPHMD RDSNFAMGVG
TATFQGQKAM AVGVQARVTE NLKATLNGGF AGSQRVVGAG MLYQWK
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