| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6469 |
|---|
| Symbol | |
|---|
| ID | 6125392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | + |
|---|
| Start bp | 512789 |
|---|
| End bp | 513706 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641647482 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001774079 |
|---|
| Protein GI | 170734965 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.113472 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0944873 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACGT TCAAGCAGAT GGAAGCGCTG TACTGGATCG TGCAGCTCGG CTCGTTCGAC
GCAGCCGCGA CGCGCCTGAA CACGACACAG TCGGCCGTCT CGAAGCGGAT CCAGGAACTC
GAACGCGCGT TCGACCTGAC CGTGTTCGAT CGCGCGCATC GCAGCGCGCG GCTCACCGAC
AAGGGTGCCG AGCTGTTCGA CCATGCGAAG ACATTGCTCG AACAGCGCGA CCGCGTGGTC
GAGCGGATGA GTTCGAAGGA AGCGCTGGTG CGGCATGTCC GGATCGGCGT GACCGAGCTG
ACCGCGCTGA CCTGGCTGCC GCGCCTGATC GCGGCGATCC AGGCCGCGTA TCCGCGCGTG
CACGTGGAAG CCGAGGTGGA CCTGACCGCG ACGCTGCGCG ACCGGCTCGC GGCCGATACG
ATCGACCTGA TCGTGGTCCC GCAGATTCAT GCGACGGACG CGTTTACGGC GACGGTGGTC
GGCGAGGTCG ACAACGCGTG GATGTGCGCG GCCGGATTCA TGCCGGCATC CCGCGCCGCC
CTAGGGTTGC AGGACATCGC GCGGTTTCCG CTGATCCTGC AGGGGAACCT GTCGGGCACC
GGGCACCTGT ACACGCGCTT TCTGCAGGAA CACGGCGTCG CGATCCAGCG CGTGCTCTCG
AGCAACAGCC TGCTCGCGCA GATCGGTCTG ACGCTGTCGG GCCTCGGCAT CAGCTATCTG
CCGAAGGCGT GCGTGGCACA CCTCGTCGCG TGCGACGCGC TGGAGATCGT GCGCACGCAG
CCGGCGCTGC CGCCGGTTCG CTACGTCGCG CTGCATCGCG CCGAACGCGC GCAGTCGCTG
ACCGCCGAGA TCGTCAGGCT CGCGGCGCAG GCGTGCGATT TCAGCACGAG CCTGCTGGAT
CCCCGGGCGC ATGACTAG
|
|---|
| Protein sequence | MLTFKQMEAL YWIVQLGSFD AAATRLNTTQ SAVSKRIQEL ERAFDLTVFD RAHRSARLTD
KGAELFDHAK TLLEQRDRVV ERMSSKEALV RHVRIGVTEL TALTWLPRLI AAIQAAYPRV
HVEAEVDLTA TLRDRLAADT IDLIVVPQIH ATDAFTATVV GEVDNAWMCA AGFMPASRAA
LGLQDIARFP LILQGNLSGT GHLYTRFLQE HGVAIQRVLS SNSLLAQIGL TLSGLGISYL
PKACVAHLVA CDALEIVRTQ PALPPVRYVA LHRAERAQSL TAEIVRLAAQ ACDFSTSLLD
PRAHD
|
|---|
| |