| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6465 |
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| Symbol | |
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| ID | 6125388 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 507386 |
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| End bp | 508813 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641647478 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001774075 |
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| Protein GI | 170734961 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0283455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA CACTGATCGC CCTTGTTTGC GCGGGCGTGC TGGCAGGCTG CACGCTGGAC
CCGACGTACC AAAGGCCGGC CGCACCGGTC GACAACACCT GGTCCACCGT GCCCCCGCTG
GCGCAGCCGA AGGCCGCGCA GAGCACGGCT GCGGCACCGC CGGGAGCTGA CCTCGGCTGG
CGCGACTTCT TCAAGGATCC GCGACTGCAA AAGCTGATCG AACTCGCGCT CGCGAACAAC
CGCGACATGC GCGTGGCCGC GCTCAACGTC GCGCAGTACG AAGCGCAGTA CCGCATTGCG
CGCGCCAACG TCGGACCGGC CATCAACGCA TCCGGCTCGG TCACGCGGGA ACGCGTGGCC
GGCTCCACGA GCGCATACAG TTCGAGCAGC GCGAGCGTGG GCCTCACATC ATGGGAAATC
GACTTCTTCG GCCGCCTGCG CAGCCTCAAG CGTCAGGCAC TGGAGCAGTA CCTCGCCACG
GACGCCGCGC GCACCAGCAC GCAGATCAGC CTGATCGCGA CCGTCGCCAC CGACTATCTG
CAACTGCTCT CCGACGAGAC GTCGTTGCAG ATCACGCAGA ACACCGTGGA TGCGGACCAG
CACACCTACG ACCTCACGGT GAACATGATG AAAATGGGCA GCGCGTCGCT GCAGGACGTG
CGCCAGGCCG AAAATTCACT GGCGAGCGCG CGGTCGAGTC TCGCCTCGTA CACGCGTGCG
GTCGCGCAGG ACCGCAACAA CCTGGTGGCC GAAATCGGTG CGCCGCTGCC CGACGATCTG
CCGCAGGGCC CTTCACTGAT GGAAAGCGAG AACACGTTTG CGGACATCGG CGAAGGCGTG
CCGTCGGATC TGCTCGCGCG CCGGCCCGAC ATCGTCGAAG CCGAGCACAC GCTGAAGGCC
GCCAACGCCA ACATCGGCGC GGCGCGCGCC GCGTTCTTTC CGAAGATCGA GCTGACGGCT
TCCGCGGGCA CCACGAGCGG CAGCCTCTCG AGCCTGTTCA AGGCCGGCAC GGGGGCGTGG
ACGTTTGCGC CGACCCTCTC GGTGCCTCTC TTCGATTTCG GCTACAACCG CGCCACGCTG
GACGTGGCGA AAGTCGAGAA AGACATCGAC ATCGCCAACT ATGAAAAGGC CATCCAGACG
GCGTTCAAGG AAGTGTCGAA TGCACTCGCG GGACGCACGA CGTACGTCAC CCAGGTAGCC
GCGGACCGCG ACTACGTCAA CTCCGCGCAG CAGTACTACG ACCTCGCGCA GGCACGCTAC
CGCAGCGGCA CCGACAGCTT CCTGACCCTG CTCGACGCGC AGCGCACGCT CTACGCCGCA
CAACAGCAAC TGGTCACGGA CATGCTCGCC AAGCAGTCCA ATCTCATCAC GCTGTACAAG
GTGCTGGGCG GCGGCTGGCG GGAAACGAGC GCGGTGGCGC AGCGGTAG
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| Protein sequence | MKRTLIALVC AGVLAGCTLD PTYQRPAAPV DNTWSTVPPL AQPKAAQSTA AAPPGADLGW
RDFFKDPRLQ KLIELALANN RDMRVAALNV AQYEAQYRIA RANVGPAINA SGSVTRERVA
GSTSAYSSSS ASVGLTSWEI DFFGRLRSLK RQALEQYLAT DAARTSTQIS LIATVATDYL
QLLSDETSLQ ITQNTVDADQ HTYDLTVNMM KMGSASLQDV RQAENSLASA RSSLASYTRA
VAQDRNNLVA EIGAPLPDDL PQGPSLMESE NTFADIGEGV PSDLLARRPD IVEAEHTLKA
ANANIGAARA AFFPKIELTA SAGTTSGSLS SLFKAGTGAW TFAPTLSVPL FDFGYNRATL
DVAKVEKDID IANYEKAIQT AFKEVSNALA GRTTYVTQVA ADRDYVNSAQ QYYDLAQARY
RSGTDSFLTL LDAQRTLYAA QQQLVTDMLA KQSNLITLYK VLGGGWRETS AVAQR
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