Gene Bcenmc03_6440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6440 
Symbol 
ID6125363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp480972 
End bp482807 
Gene Length1836 bp 
Protein Length611 aa 
Translation table11 
GC content67% 
IMG OID641647453 
Producthistidine kinase 
Protein accessionYP_001774050 
Protein GI170734936 
COG category[T] Signal transduction mechanisms 
COG ID[COG3300] MHYT domain (predicted integral membrane sensor domain)
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.920923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGG GACGGGCGCC TGCCCCTACC GCGGCGATGC ACTCAACCCG TTGCGGGCGC 
CCGATCATGC ATGGCATCTA CAACCTTCCG CTCGTCGTGC TGTCGCTCGC GATCGCGACG
CTGGCGTCGT ATACGACGCT CGACCTCGCC GCGTTCATCT CGCTGCTCGA CGATCCGAAG
CTCAAGCGCG CGTGGCTCGG CGGTGGCGCG GCGGCGATGG GCACCGGAAT CTGGTCGATG
CATTTCGTCG GCATGCTCGC GTTTTCGTTG CCGGTGCCGC TCGGCTATGC GTGGCAGGAA
ACGGGCGCGT CGCTGGCGAT CGCGGTGCTC GTATCGTATT TCGCGCTGAA CGTCGTCACG
CGCGCACGGC TGGGCTGGCG GCGGCTGGGC ATGGGCGGCG TGCTGATGGG CGGCGGGATC
GCCGGCATGC ACTACACGGG AATGGCCGCG ATGCACATGC AGCCCGGCAT TCGCTACGAT
GCCGCGCTGT TCGCCGCGTC GATCGGCATC GCGGTGATCG CATCGACGGC CGCGCTGTGG
ATCGCACAGG CGTTGCGCAT GCAGCAGGCG CGCCACGCGA CCGCGCAACG TATCGGCGCG
GCCGTCATCA TGGGCATCGC GATTACCGGC ATGCACTACA CGGCGATGGC GGCCGCGCAT
TTCGCGCCGG ATGCGCGGTG CGGCGCCGCG AACGGCGTCG ACGCGCCGTG GCTGGCGACC
ACCGTCGCGT TGTTTACGAT GGCGACGCTG GTCGTCACGC TGCTGGTGTG CCGCTTCGAT
GCGCGCACGA CTTTCCTGCG CGGGATGACC GACACGCTCG AACGGCTCGT GCGGGTGCGA
ACCGGCGAAC TCGAACGCGC GCTGTACAGC TACGAGCAAA CGACGCAGAT GCTGCAACGC
ACGCGCGAGA ACATGGCGGC CGAGATCGAC GAACGCAAGG CCGCGCACGC GCTGCTCGAA
CAGGAGAAGG ACGAGCAGCG ACGCTTGCTG CATGCGCTCG CGGAAACCCA CGAGCAGTTG
CTGCAGTCGG AAAAACTCGC GTCGATCGGC CAGCTCGCGG CCGGCGTCGC GCACGAGATC
AACAATCCGA TCGGCTTCGT CAGCGCGAAC CTCAATACGT TGAAGACATG GGTGCGCAGC
CTGCTCGACG TGATCGCCGC GCATGAAGCC GCGCTGCCGC AGCTCGATCC GGCCACCCGC
GATGCGTTGA CGGCCGCGCA CCGCGCGGCG GATCTCGACT ACGTCCGCGA CGAGATCGCG
ATGCTGATCG ACGAGTCGAT CGACGGCGCG CTGCGCGTGC GGCGCATCGT GCAGGATCTG
CGCGATTTTT CCCGCCCGGC CAGCGACGAA TGGAGCGTGG TCGATCTGCA TGCGGGCCTC
GAGAGCACGC TCAACGTCGT CCACAACGAG CTCAAGTACA AGGCCGACAT CGTGCGCGAT
TACGGCGATG TCCCGCACGT CGAATGCTTG CCGTCGCAAT TGAATCAGGT CTTCATGAAC
CTGCTGGTCA ACGCGGCGCA GGCGATTCCG GAGCGCGGCG TGATCACGAT CAGCACGTCG
AGCGACGGCG ATCAGGTGTC GATCGCGATC AGCGATACCG GCGCCGGCAT GACGCCCGAC
GTCGTCCGGC GGATCTTCGA TCCGTTCTTC ACCACGAAAC CGGTCGGGCA GGGCACAGGG
CTCGGGCTGT CGGTATCGCA CGGCATCGTC GAGCGTCATC GCGGCGCGAT CGACGTGACC
AGCGAGCCGG GGCGCGGCAC GACCTTCCGG ATACGGTTGC CGGTTCGGCG TGCCGGCGAG
CGCGCGAACG CGGCAGCGCT GGAGCAGCGG GTTTGA
 
Protein sequence
MAAGRAPAPT AAMHSTRCGR PIMHGIYNLP LVVLSLAIAT LASYTTLDLA AFISLLDDPK 
LKRAWLGGGA AAMGTGIWSM HFVGMLAFSL PVPLGYAWQE TGASLAIAVL VSYFALNVVT
RARLGWRRLG MGGVLMGGGI AGMHYTGMAA MHMQPGIRYD AALFAASIGI AVIASTAALW
IAQALRMQQA RHATAQRIGA AVIMGIAITG MHYTAMAAAH FAPDARCGAA NGVDAPWLAT
TVALFTMATL VVTLLVCRFD ARTTFLRGMT DTLERLVRVR TGELERALYS YEQTTQMLQR
TRENMAAEID ERKAAHALLE QEKDEQRRLL HALAETHEQL LQSEKLASIG QLAAGVAHEI
NNPIGFVSAN LNTLKTWVRS LLDVIAAHEA ALPQLDPATR DALTAAHRAA DLDYVRDEIA
MLIDESIDGA LRVRRIVQDL RDFSRPASDE WSVVDLHAGL ESTLNVVHNE LKYKADIVRD
YGDVPHVECL PSQLNQVFMN LLVNAAQAIP ERGVITISTS SDGDQVSIAI SDTGAGMTPD
VVRRIFDPFF TTKPVGQGTG LGLSVSHGIV ERHRGAIDVT SEPGRGTTFR IRLPVRRAGE
RANAAALEQR V