| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6426 |
|---|
| Symbol | |
|---|
| ID | 6125349 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia MC0-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010512 |
|---|
| Strand | - |
|---|
| Start bp | 462069 |
|---|
| End bp | 462806 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641647439 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001774036 |
|---|
| Protein GI | 170734922 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTAA CCATTGCGTA CATCGAGGAA CCTCCGTTTG GGTGGACCGA AGCGGATGGC
ACCGCCACAG GTGCCGATCT CGAGCTCGCG GCGACGATCC TTCGGCAGAT AGGCGTCACC
CGGATCGAGT ATTGCCCGAC GACGTTCAGC GAGTTGCTGC CCGGCGTCGC ATCGGGTCAC
TGGGACATGA ACGTGCCGCT CTTCGTGACA CCGCAGCGGG CCCATACCGT CGCGTTCAGC
GTGCCGGTGT GGGGAATCGA GGACGGTTTC CTGGTACGGC CCGGCAACCC GAAGGCACTC
AGGCGTTATG CGTCGATCGC CGAACGTCCC GATGCGCGCC TCGGCATCAT TGCCGGACAG
GTACAGCATG ATTCCGCGAT GGCGGCAGGC GTGAGCCGGC GGCAAATCGT CGTCTTCGAA
CAGCAAGCCG ACGCGATCGC GGCCGTTCTG TCCGGCGTGA TCGACGCCTA TGCGAGCACC
GCTTTGGGGA ATCGAATCGT GGCGGGCCGG ATAGGCAGCG CGATGATCGA GGCCGTCGCG
CACGAGCCGG ATGGCAACGG CAGCCAGCGG ACGCCTCCGC TGGGTGCGTT TTCATTCAAC
CGGGAAAACC GGGATCTCCT GGCGGCGTTC AATCGGCAAC TGCGCGCGTA CGTCGGTTCG
CCGGACCATC GCGCTCGCAT GGCGAGATTC GGGTTGACGG CTCGCGAGAT CGATCCAGCC
GTCTCGCCGA CAGGATAG
|
|---|
| Protein sequence | MKVTIAYIEE PPFGWTEADG TATGADLELA ATILRQIGVT RIEYCPTTFS ELLPGVASGH
WDMNVPLFVT PQRAHTVAFS VPVWGIEDGF LVRPGNPKAL RRYASIAERP DARLGIIAGQ
VQHDSAMAAG VSRRQIVVFE QQADAIAAVL SGVIDAYAST ALGNRIVAGR IGSAMIEAVA
HEPDGNGSQR TPPLGAFSFN RENRDLLAAF NRQLRAYVGS PDHRARMARF GLTAREIDPA
VSPTG
|
|---|
| |