| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcenmc03_6405 |
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| Symbol | |
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| ID | 6125328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia MC0-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010512 |
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| Strand | + |
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| Start bp | 439249 |
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| End bp | 440085 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641647418 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001774015 |
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| Protein GI | 170734901 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.609291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCG ACCAATACGC GGTGATCGGC AATCCGATCG GGCATACGAA GTCCCCGCTG
ATTCACGGCC TCTTCGCGCA AGAGACGAAG CAGGACCTCC GCTATACGGC GATCGAGGGC
CCGCTCGAGC CGGCAGGCGC TTTTGCTGCC GCGGTGCGGG CGTTTTTCGA TGGCGGCGGC
AAGGGCATCA ACGTCACCGC GCCGTTCAAG CTCGACGCAT TCGCGATGTC CGACGAACGC
AGCGAGCGGG CGCAGCTCGC GGGCGCGGCC AACGCGCTCA AGTTCGACGG CGGCCGCATC
CTGGCGGACA ACTTCGACGG CATCGGGCTG GTTCGCGATA TCGAGGCGAA CCTCAATCTG
CCGATGGCCG GCAAGCGCGT GCTGGTGCTC GGGGCGGGCG GCGCGGCGCG CGGCGCGCTG
TTGCCGTTTC TCGAAGCCCG CCCGGCGGAA CTCGTGATCG CGAATCGCGA CGTCGACAAG
GCGCGCGCGC TGGCCGCGCA GGTCGCCGGA CGCGGCCCTC TGGTTGCCGG CAGCTACGCG
GACCTCGCGC GGATGGGACG TTTCGACCTG GTCGTCAACG CGACGTCGGC CAGTTTGACC
GGCGATCTGC CGCCTGTGCC GCCGAGCGTG TTCAGTCCGA AGGGAACCGC CTACGAACTC
GCCTACGGCA AGCGGCTCAC GCCGTTTCTC CGGCTCGCGA AAAACGCGGG CGTGCACGGC
ATCGCGGATG GTGTCGGCAT GCTGGTCGAG CAGGCGGCCG AGGCGTTCGC ATGGTGGCGC
GGCGTACGGC CCGCGACCAG CGCGGTGATC GACCGGCTGG CCGTGCCGTT CGACTGA
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| Protein sequence | MMTDQYAVIG NPIGHTKSPL IHGLFAQETK QDLRYTAIEG PLEPAGAFAA AVRAFFDGGG
KGINVTAPFK LDAFAMSDER SERAQLAGAA NALKFDGGRI LADNFDGIGL VRDIEANLNL
PMAGKRVLVL GAGGAARGAL LPFLEARPAE LVIANRDVDK ARALAAQVAG RGPLVAGSYA
DLARMGRFDL VVNATSASLT GDLPPVPPSV FSPKGTAYEL AYGKRLTPFL RLAKNAGVHG
IADGVGMLVE QAAEAFAWWR GVRPATSAVI DRLAVPFD
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