Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6342 |
Symbol | |
ID | 6125265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 357823 |
End bp | 358815 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641647355 |
Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_001773952 |
Protein GI | 170734838 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGT TCTGGTCCCG CGTGTGGCAA TCCGCGGCCG TCGTCGTTGC CGCGCTTGCC GGCCTCACGT CCATGCAAGC GCAGGCGGCG ACGCCCGCGG AAATCCGCGT CGACTATGCG TACTACTCGC CCGAGAGTCT CGTGATCCGC CACTTCGGCT GGCTCGACGA TGCGTTCAAG GCCGACGGTA CGTCGATTCG CTGGGTGCTG AGCCTCGGCA GCAATCGCGC GCTCGAATAC CTGAACAGCG GCGCGGTCGA TTTCGGGTCG GCCGCGGGGC TGGCGTCGGT GCTCGCTCGC GCGAACGGCA ACCCGATCCA CACCGTCTAC GTGTTCTCGC GCCCCGAATG GACCGCGCTC GTGGTACGCA AGGATTCGCC GATCCGTTCG CTCGCCGACC TGAAGGGCAA GAAGATCGCC GCGACACGCG GCACCGATCC GTTCCTGTTC ACGCTGCGCG CGCTGCACAC CGTTGGCCTG ACGCGCGACG ACGTCGAGAT CGTCAACCTG CAGCATCCGG ATGGCCGCAC CGCGCTCGCG AACGGTCAGG TCGATGCGTG GGCCGGGCTC GATCCGCACA TGGCAGTCGC CCAGCTCGAC GATGGCGCGC GCCTGCTGTA CCGCAACGTC GCGTTCAATA CGTACGGGTT CCTGAACGTT CGCGACGCGT TCGCCAGCCA GTATCCGCAG GCGGTCGAGC GCGTGCTGAA GGTCTACGAC CGTGCGCGCC AGTGGATCGT CGCGCATCCG GCCGAAACCG CGCAGATCAT TGCCGACGAA TCGAAGGTGT CGCTGCCGGT CGCGAAGCTG CAGCTGCAGC GCAACGACTT CAGCGATCCG GTGCCGGGCG ACACGCAGCG CGCGGCGCTG AAGGCCGCGG CGCCGGTGCT GACGGCCGAG CAATTGACCA AGCCGGGCGT CGATCCCGCG AAGATCGTCG ATACGCTGAT CGATCCGTCG TTCGCGCGCC CGATCGTCGC CGCGTCGCAC TGA
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Protein sequence | MKPFWSRVWQ SAAVVVAALA GLTSMQAQAA TPAEIRVDYA YYSPESLVIR HFGWLDDAFK ADGTSIRWVL SLGSNRALEY LNSGAVDFGS AAGLASVLAR ANGNPIHTVY VFSRPEWTAL VVRKDSPIRS LADLKGKKIA ATRGTDPFLF TLRALHTVGL TRDDVEIVNL QHPDGRTALA NGQVDAWAGL DPHMAVAQLD DGARLLYRNV AFNTYGFLNV RDAFASQYPQ AVERVLKVYD RARQWIVAHP AETAQIIADE SKVSLPVAKL QLQRNDFSDP VPGDTQRAAL KAAAPVLTAE QLTKPGVDPA KIVDTLIDPS FARPIVAASH
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