Gene Bcenmc03_6342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6342 
Symbol 
ID6125265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp357823 
End bp358815 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content67% 
IMG OID641647355 
Productaliphatic sulfonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_001773952 
Protein GI170734838 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGT TCTGGTCCCG CGTGTGGCAA TCCGCGGCCG TCGTCGTTGC CGCGCTTGCC 
GGCCTCACGT CCATGCAAGC GCAGGCGGCG ACGCCCGCGG AAATCCGCGT CGACTATGCG
TACTACTCGC CCGAGAGTCT CGTGATCCGC CACTTCGGCT GGCTCGACGA TGCGTTCAAG
GCCGACGGTA CGTCGATTCG CTGGGTGCTG AGCCTCGGCA GCAATCGCGC GCTCGAATAC
CTGAACAGCG GCGCGGTCGA TTTCGGGTCG GCCGCGGGGC TGGCGTCGGT GCTCGCTCGC
GCGAACGGCA ACCCGATCCA CACCGTCTAC GTGTTCTCGC GCCCCGAATG GACCGCGCTC
GTGGTACGCA AGGATTCGCC GATCCGTTCG CTCGCCGACC TGAAGGGCAA GAAGATCGCC
GCGACACGCG GCACCGATCC GTTCCTGTTC ACGCTGCGCG CGCTGCACAC CGTTGGCCTG
ACGCGCGACG ACGTCGAGAT CGTCAACCTG CAGCATCCGG ATGGCCGCAC CGCGCTCGCG
AACGGTCAGG TCGATGCGTG GGCCGGGCTC GATCCGCACA TGGCAGTCGC CCAGCTCGAC
GATGGCGCGC GCCTGCTGTA CCGCAACGTC GCGTTCAATA CGTACGGGTT CCTGAACGTT
CGCGACGCGT TCGCCAGCCA GTATCCGCAG GCGGTCGAGC GCGTGCTGAA GGTCTACGAC
CGTGCGCGCC AGTGGATCGT CGCGCATCCG GCCGAAACCG CGCAGATCAT TGCCGACGAA
TCGAAGGTGT CGCTGCCGGT CGCGAAGCTG CAGCTGCAGC GCAACGACTT CAGCGATCCG
GTGCCGGGCG ACACGCAGCG CGCGGCGCTG AAGGCCGCGG CGCCGGTGCT GACGGCCGAG
CAATTGACCA AGCCGGGCGT CGATCCCGCG AAGATCGTCG ATACGCTGAT CGATCCGTCG
TTCGCGCGCC CGATCGTCGC CGCGTCGCAC TGA
 
Protein sequence
MKPFWSRVWQ SAAVVVAALA GLTSMQAQAA TPAEIRVDYA YYSPESLVIR HFGWLDDAFK 
ADGTSIRWVL SLGSNRALEY LNSGAVDFGS AAGLASVLAR ANGNPIHTVY VFSRPEWTAL
VVRKDSPIRS LADLKGKKIA ATRGTDPFLF TLRALHTVGL TRDDVEIVNL QHPDGRTALA
NGQVDAWAGL DPHMAVAQLD DGARLLYRNV AFNTYGFLNV RDAFASQYPQ AVERVLKVYD
RARQWIVAHP AETAQIIADE SKVSLPVAKL QLQRNDFSDP VPGDTQRAAL KAAAPVLTAE
QLTKPGVDPA KIVDTLIDPS FARPIVAASH