Gene Bcenmc03_6333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6333 
Symbol 
ID6125256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp347194 
End bp347790 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content69% 
IMG OID641647346 
Productalkylhydroperoxidase 
Protein accessionYP_001773943 
Protein GI170734829 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCAC TGCCCTTTTC GGAGAATCCT GTGAGCCGCC TGCCGTTGCC CACCATCGAG 
ACCGCCCCCG CGGCCAGCCA GCCCTTCCTC GAAAAATCGC AGCGCGCGAA CGGCTTCCTG
CCGAACCTCG TGCGTTCGCT CGCGAATGCG CCGGTCGCCC TCGAAACCTA TCTGACCGTC
GCGGAGATCA ACGGCCGCGC GGGCCTCACG TTCGCCGAGC GCGAAGCCGT GCAGATCACC
GCGGCCGCTG TCCACGGCTG TGCATTCTGC GTGGCCGGAC ACACCGCCGC CGCACTGAAA
AAAGCCCAGG TCGAGCGCGC CGACGTCGAC GCACTGCGCG ACGGCGAGCC GGTCGCCGAG
CCGCGGCTGG AAGCCGTCGC TACTTTCACG CGCGCCGTGA TCGCGACGCG CGGCGCCGTG
ACCGACGACG CGCTCGCCGC GTTCCTGGCC GCCGGCTTCA CCGAAGCGAA CGCACTCGAA
GTGGTGCTGG GCGTGAGCCT CGCGACGCTG TGCAACTTCG CGAACAATCT GGCGCGCAAC
GAACTCAACC CCGAACTGGC GGCATACCGA TGGGAACCCC GGACACAGGC CGCCTGA
 
Protein sequence
MISLPFSENP VSRLPLPTIE TAPAASQPFL EKSQRANGFL PNLVRSLANA PVALETYLTV 
AEINGRAGLT FAEREAVQIT AAAVHGCAFC VAGHTAAALK KAQVERADVD ALRDGEPVAE
PRLEAVATFT RAVIATRGAV TDDALAAFLA AGFTEANALE VVLGVSLATL CNFANNLARN
ELNPELAAYR WEPRTQAA