Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6329 |
Symbol | |
ID | 6125252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | - |
Start bp | 342063 |
End bp | 343385 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641647342 |
Product | xylose isomerase |
Protein accession | YP_001773939 |
Protein GI | 170734825 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2115] Xylose isomerase |
TIGRFAM ID | [TIGR02630] xylose isomerase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.158515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTATT TCGAGCACAT TCCCGCGATT CGCTACGAAG GCCCGCAGTC GGACAACCCG CTCGCCTATC ACCATTACGA CCCTGACAAG CGTGTGCTCG GCAAGACGCT CGCCGAGCAT CTGCGGATCG CGGTCTGCTA CTGGCACACG TTCGTATGGC CGGGCCACGA CATCTTCGGG CAGGGCGCGT TCCAGCGGCC GTGGCAGCAG CCGGGCGACG CGCTCGAGCG GGCGCGGCAG AAGGCCGATG CGGCGTTCGA ATTCTTCACG AAGCTCGGCA CGCCGTTCTA TACGTTCCAT GACACCGACG TCGCGCCGGA AGGCGACAGC CTGCGCGACT ACGCAGCCAA TTTCGCGCGG ATGGTCGACT ATCTCGGCGA GCGTCAGCAC GCAAGCGGCG TGCGGCTCCT GTGGGGCACG GCGAACCTGT TCTCGCACCC GCGCTTCGCG GCCGGCGCCG CGACCAACCC GAACCCCGAC GTGTTCGCGT GGGCCGCGAC CCAGGTGTGC CATGCGCTCG ACGCGACCCA CCGGCTCGGC GGCGAAAACT ACGTGCTGTG GGGCGGCCGG GAAGGCTACG AGACGCTGCT CAATACCGAC CTGAAGCGCG AGCGCGACCA GTTCGCCCGC TTCCTGTCGA TGGTCGTCGA GCACAAGCAC CGGATCGGCT TCAAGGGCGC GCTGCTGATC GAGCCGAAGC CGCAGGAGCC GACCAAGCAC CAGTACGACT ACGACGTCGC GACCGTGCAC GGCTTCCTCG TGCAGTACGG ACTCCAGAAC GAGATTCGCG TGAACATCGA GGCGAACCAC GCGACGCTCG CCGGTCATTC GTTCCATCAC GAGATCGCGA ACGCCTTCGC GCTCGGCGTG TTCGGCAGCG TCGACGCGAA CCGCGGCGAT CCGCAGAACG GCTGGGACAC CGACCAGTTC CCGAACAGCG TCGAGGAGCT GACGCTCGCG TTCTACGAGA TCCTGCGTCA CGGCGGCTTC ACGACCGGCG GAATGAACTT CGACGCGAAG GTGCGGCGCC AGAGCATCGA TCCGGAAGAT CTGTTCTACG GCCACGTCGG CGCGATCGAC GTGCTCGCGC TCGCGCTCGA ACGCGCGGCG GTGCTGGTCG AGAACGACCG GCTCGACGCG CTGCGCCGGC AACGCTACGC GCAGTGGGAC GACGCGTTCG GCCGCAAGAT CCTGTCCGGC GGCTATACGC TGGAATCGCT GGCGGCCGAC GCGCTCGCGC GTGGGGTGAA CCCGCGGCAT GCGAGCGGCG CGCAGGAGCG GCTGGAGAAC ATCGTGAACC AGGCGATCTA CGGGCTGCGC TGA
|
Protein sequence | MSYFEHIPAI RYEGPQSDNP LAYHHYDPDK RVLGKTLAEH LRIAVCYWHT FVWPGHDIFG QGAFQRPWQQ PGDALERARQ KADAAFEFFT KLGTPFYTFH DTDVAPEGDS LRDYAANFAR MVDYLGERQH ASGVRLLWGT ANLFSHPRFA AGAATNPNPD VFAWAATQVC HALDATHRLG GENYVLWGGR EGYETLLNTD LKRERDQFAR FLSMVVEHKH RIGFKGALLI EPKPQEPTKH QYDYDVATVH GFLVQYGLQN EIRVNIEANH ATLAGHSFHH EIANAFALGV FGSVDANRGD PQNGWDTDQF PNSVEELTLA FYEILRHGGF TTGGMNFDAK VRRQSIDPED LFYGHVGAID VLALALERAA VLVENDRLDA LRRQRYAQWD DAFGRKILSG GYTLESLAAD ALARGVNPRH ASGAQERLEN IVNQAIYGLR
|
| |