Gene Bcenmc03_6313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcenmc03_6313 
Symbol 
ID6125237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia MC0-3 
KingdomBacteria 
Replicon accessionNC_010512 
Strand
Start bp321937 
End bp322884 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content67% 
IMG OID641647327 
Productperiplasmic binding protein/LacI transcriptional regulator 
Protein accessionYP_001773924 
Protein GI170734810 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.330305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAT CCATCCTGCT GGCGGCATCG GCGTGCGTGT TCGCGGTGTG CAGCAGCGGC 
GCGTATGCGG CGGGCGGCGA GATCGCGGTG ATCGTCAAGA CGGTCAATTC GAACTACTGG
CAGAACGTGC AGAAAGGCGC GAAGGCGGCG CTCGACGGCG CCAAGGGCTA CACGATGACG
TTCCAGGGCC CGGCGGCCGA GTCGGACATC AGCGGGCAGG TCAACATGGT CGACAACGCG
GTCACGCGTC ATGTGGCGGG CATCGTGCTC GCGCCGTCCG ATCCCGATGC GCTCGTGCCC
GCGATCAAGA AGGCGTGGGA AGCGCACATC CCCGTCGTGC TGATCGACTC GGCGATCGCC
GACGCCGGCA AACCGTACTA CCAGGCGTTC CTGTCGACCG ACAACGAGAA GGCGGGCGCA
CTGTGCGCGA AGGCGCTGAT CGACCGCGTC GGGCAGTCCG GCAAGATCGC GATCATGTCG
TACGTGCCGG GCGCGGGGTC GGAGGTCAGC CGTGTCGGCG GGTTCCGCAA GTACATCGAG
AGCCATTCGA AGCTGCAGGT CGTCGGCCCG TACTACTCGC AGTCGCAAAT GGCGACCGCG
CTGAACCAGA CGACCGACGT GCTGTCGGCG AACCCGGACC TGAAGGGCAT CTTCGGCGCG
AACGAGCCGA CCGCGGTCGG TATGGGCCGT GCGCTGAAGC AGTCGGGCAA GGCGGGCAAG
GTGGTGGCGA TCGGGTTCGA CGGCAACGAG GACCTGCAGG GCTTCGTGCG CGACGGCACC
GTGCAGGCGA TCGCCGTGCA GGGCTCGTGG CAGATGGGGA ACCAGGGCGT GCGCACGGCG
CTCGACGTGA TCGAGCGCAA GCCCGCGCCG AAGCTGATCG ATACCGGCGT CGTGATGGTC
GACAAGCAGA ACCTCGATTC GCAGGCGGCG AAGAACGTCC TGTACTGA
 
Protein sequence
MNKSILLAAS ACVFAVCSSG AYAAGGEIAV IVKTVNSNYW QNVQKGAKAA LDGAKGYTMT 
FQGPAAESDI SGQVNMVDNA VTRHVAGIVL APSDPDALVP AIKKAWEAHI PVVLIDSAIA
DAGKPYYQAF LSTDNEKAGA LCAKALIDRV GQSGKIAIMS YVPGAGSEVS RVGGFRKYIE
SHSKLQVVGP YYSQSQMATA LNQTTDVLSA NPDLKGIFGA NEPTAVGMGR ALKQSGKAGK
VVAIGFDGNE DLQGFVRDGT VQAIAVQGSW QMGNQGVRTA LDVIERKPAP KLIDTGVVMV
DKQNLDSQAA KNVLY