Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcenmc03_6306 |
Symbol | |
ID | 6125230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia MC0-3 |
Kingdom | Bacteria |
Replicon accession | NC_010512 |
Strand | + |
Start bp | 313912 |
End bp | 315873 |
Gene Length | 1962 bp |
Protein Length | 653 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641647320 |
Product | beta strand repeat-containing protein |
Protein accession | YP_001773917 |
Protein GI | 170734803 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
TIGRFAM ID | [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.662487 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCGT CACGAAGCCG TTTCCCGCTG CACGTCGCGG CATTGTCGAG TGCGATCGTA CTGGCTGCCT GCGGCGGCGG CGACGACGTC ACGTCGACCG GCACGATCGC CGCGGCCGTT CCCGCGCCGC CCGCCGACCC CGGCTTCGTC GACAGCGCGC CGATCCCGAG CGCACCCGCT TTCGTCGACA ACGTCGCGAC CAACCAGCGC GGCGATGCGC GCTATGCGAC GCTGTCGACC AACGCCGCGG TGCGCGTGTT GAGCCGTTTC CTCGATCTGT GGCAGCCGGC GACGATGCTG GTCGACGCGG GCGTGACCGC GCCGGCGAAC GGCGCGTTCC CGGCCATCTC GCCGTCGACC TGCTCCGGGC TGCCGAACAG CGGCGTGCCG TGCGGCACGA TCCTGAACGA TGCGGTGCTG TCGGCCAACG TGCAGTACGT GATCAACGCG ACGACCGCGC GTACGCCGCA ACAGGCCGAT GCCGCGTACT ACGACGACCG GCGCGGCAAG GGATACAGCG TGACCGACGG CATGGGCCCG CTCACCGCCG CGTGGCGCAC CGCGGCCCAG CAGACGACCA GCATCACCAG CGTGCCCGCC GATGCGACGA CCGTGCTGTA CAACGATTCC GGCAACAACG TCGGCGTCGG CAGCAGCAGC GGCAACGCCA GCTTCGGCAA GGTCGTCGAT CTGCTCAACG AAATGGGCAA CAACGCGTCG ACCGAGCCGT CGAAGCGCTT CTTCAAATAC GCGCGCCCGT ACCGCTGGAG CACGAGTGTG GTCGTCGCGC CGACGCTCGT GCCGGCCGAA AGCACGACGC CCGCGACCGA CGGCGGCTTC GTCAGCGGCC ACACGGCCGA GGCCGTGCGC GACGCGACGA CGATGGCGTG GCTCGTGCCG GAACGCTTCC AGGAAATGCT CAGCCGCGGC CTCGAACTGG GCGAGAACCG GATTCTCGCC GGCATGCATT CGCCGCTCGA CGTGATCGGC GGCCGCACGC TCGCGCTGGC CATCAGCGCG GCGAACCTGA CCGCGTACGC CAGCGACGCG CAGGCCGCCT ACACGCAAGC GCATCAGACG CTGCAGCAAC TGACCGGCAC GAGCGCCACG ACCTTCTCCG CATTCGCGCA CTCGGGCACG ACGGCCACCG ACCGGTTCGC CGACTACACG ACGAACCGGG CCGCGTTCCT GCGCCGCATG ACCTTCGGCT TCGGTGCGAT CGAATCGACG AACGCACCGC CGGTCGTGCC GAAGGGCGCG GAGATCCTGC TGCAGACGCG CTTCCCGTAC CTGAGCGCCG ACCAGCGGCG CGTCGTGCTG AAGACGACCG AGCTGCCGTC CGGCTATCCG GTCATGGACG ACGCGGAAGG CTGGGGGCGC CTGAACCTGT TCGCGGCAGC CGACGGCTAC GGCGCGTTCA ACGGCAACGT GATCGTGTCG ATGGATGCGT CGCAGGGCGG CCTCAATGCC GCCGACCTGT GGCGCAACGA CGTCGCGGGC GCCGGCAAGC TGACGCTGCA AGGCAGCGGC ACGCTGACGC TGGCGGGCAA CAACGCCTAC ACGGGCGGCA CGCAGGTGAG CGGCGGCACG CTGGTGGCCG CGTCGACGAC GGCGTTCGGC AAAGGCGACG TGTACGTCGG CCCGGGCGGC AGCGTGCGGA TCGCGGCCGC CGCGCCGGTG ACGATCGCGA CCCGCTACAC GCAGCTCGAC AACACGACGC TCGAACTCGA CATCGACGGC AACGGCGGCG GACGGCTGCG CGTGGGCGGC CCGCTCACCG TCGCGGGCGG CACGCTGCAC GTGAAGTTCG TGAACGGCTA CGCGCCGAAG GCCGGCGACA CCATCGCGCT GATCGACGGC GCGGCGGCTG CCGCGACGTT CGCGACGGTG ACGGTCGACG GGTTCAAGGC CACGCCGGTG TACACCGCGA CGGGCGTGTC GATCACGTTG TCGGCGGCAT AA
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Protein sequence | MFASRSRFPL HVAALSSAIV LAACGGGDDV TSTGTIAAAV PAPPADPGFV DSAPIPSAPA FVDNVATNQR GDARYATLST NAAVRVLSRF LDLWQPATML VDAGVTAPAN GAFPAISPST CSGLPNSGVP CGTILNDAVL SANVQYVINA TTARTPQQAD AAYYDDRRGK GYSVTDGMGP LTAAWRTAAQ QTTSITSVPA DATTVLYNDS GNNVGVGSSS GNASFGKVVD LLNEMGNNAS TEPSKRFFKY ARPYRWSTSV VVAPTLVPAE STTPATDGGF VSGHTAEAVR DATTMAWLVP ERFQEMLSRG LELGENRILA GMHSPLDVIG GRTLALAISA ANLTAYASDA QAAYTQAHQT LQQLTGTSAT TFSAFAHSGT TATDRFADYT TNRAAFLRRM TFGFGAIEST NAPPVVPKGA EILLQTRFPY LSADQRRVVL KTTELPSGYP VMDDAEGWGR LNLFAAADGY GAFNGNVIVS MDASQGGLNA ADLWRNDVAG AGKLTLQGSG TLTLAGNNAY TGGTQVSGGT LVAASTTAFG KGDVYVGPGG SVRIAAAAPV TIATRYTQLD NTTLELDIDG NGGGRLRVGG PLTVAGGTLH VKFVNGYAPK AGDTIALIDG AAAAATFATV TVDGFKATPV YTATGVSITL SAA
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